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CAZyme Information: MGYG000001507_00425
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus ihuae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus ihuae | |||||||||||
| CAZyme ID | MGYG000001507_00425 | |||||||||||
| CAZy Family | CBM46 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 430281; End: 432494 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM46 | 44 | 111 | 2.6e-16 | 0.8275862068965517 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam03442 | CBM_X2 | 2.46e-29 | 31 | 113 | 1 | 83 | Carbohydrate binding domain X2. This domain binds to cellulose and to bacterial cell walls. It is found in glycosyl hydrolases and in scaffolding proteins of cellulosomes (multiprotein glycosyl hydrolase complexes). In the cellulosome it may aid cellulose degradation by anchoring the cellulosome to the bacterial cell wall and by binding it to its substrate. This domain has an Ig-like fold. |
| pfam00395 | SLH | 7.25e-12 | 611 | 652 | 1 | 42 | S-layer homology domain. |
| NF033190 | inl_like_NEAT_1 | 5.27e-11 | 550 | 669 | 580 | 700 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| cd00063 | FN3 | 4.56e-10 | 134 | 209 | 13 | 92 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| pfam00041 | fn3 | 6.55e-10 | 216 | 292 | 2 | 85 | Fibronectin type III domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBH18999.1 | 2.75e-206 | 216 | 737 | 1119 | 1638 |
| QCT04045.1 | 6.99e-144 | 170 | 737 | 1084 | 1611 |
| QNK56141.1 | 3.08e-141 | 315 | 737 | 1527 | 1949 |
| ANY68648.1 | 2.97e-140 | 322 | 737 | 1497 | 1912 |
| ANY68649.1 | 2.37e-130 | 325 | 737 | 1249 | 1661 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4U3H_A | 3.51e-06 | 135 | 209 | 27 | 100 | Crystalstructure of FN3con [synthetic construct] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| C6CRV0 | 7.18e-26 | 342 | 733 | 1086 | 1461 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| P38536 | 9.55e-25 | 536 | 734 | 1666 | 1858 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
| P38535 | 1.67e-24 | 538 | 734 | 894 | 1084 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| P36917 | 3.18e-16 | 538 | 651 | 1042 | 1154 | Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1 |
| P38058 | 9.85e-15 | 28 | 115 | 1610 | 1697 | Cellulose-binding protein A OS=Clostridium cellulovorans OX=1493 GN=cbpA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.998697 | 0.001329 | 0.000008 | 0.000001 | 0.000001 | 0.000001 |