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CAZyme Information: MGYG000001507_05098
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus ihuae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus ihuae | |||||||||||
| CAZyme ID | MGYG000001507_05098 | |||||||||||
| CAZy Family | CBM16 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3496; End: 7317 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT39 | 850 | 1082 | 4.5e-56 | 0.9147982062780269 |
| CBM16 | 30 | 153 | 5.2e-17 | 0.9224137931034483 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam16192 | PMT_4TMC | 4.09e-25 | 1094 | 1269 | 1 | 198 | C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes. |
| COG5542 | COG5542 | 2.48e-23 | 304 | 589 | 92 | 370 | Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism]. |
| COG1928 | PMT1 | 3.63e-21 | 1093 | 1273 | 498 | 695 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
| COG4346 | COG4346 | 3.32e-09 | 865 | 1222 | 122 | 409 | Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]. |
| pfam02366 | PMT | 7.15e-09 | 851 | 1080 | 19 | 237 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QSF45552.1 | 0.0 | 1 | 1273 | 1 | 1273 |
| CQR52353.1 | 0.0 | 1 | 1273 | 1 | 1275 |
| AIQ39188.1 | 0.0 | 1 | 1273 | 1 | 1279 |
| AIQ27397.1 | 0.0 | 1 | 1273 | 1 | 1279 |
| AIQ56104.1 | 0.0 | 1 | 1273 | 1 | 1279 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| L8F4Z2 | 9.91e-24 | 855 | 1271 | 67 | 515 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1 |
| Q8NRZ6 | 2.20e-19 | 877 | 1271 | 98 | 519 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1 |
| Q5ACU3 | 1.02e-06 | 1096 | 1271 | 518 | 716 | Dolichyl-phosphate-mannose--protein mannosyltransferase 5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PMT5 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000258 | 0.999043 | 0.000204 | 0.000170 | 0.000167 | 0.000157 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 7 | 29 |
| 219 | 238 |
| 250 | 272 |
| 335 | 354 |
| 361 | 380 |
| 384 | 401 |
| 414 | 436 |
| 446 | 468 |
| 481 | 498 |
| 513 | 535 |
| 542 | 561 |
| 566 | 580 |
| 587 | 609 |
| 619 | 641 |
| 689 | 708 |
| 898 | 920 |
| 953 | 972 |
| 992 | 1014 |
| 1059 | 1081 |
| 1154 | 1171 |
| 1178 | 1195 |
| 1200 | 1222 |
| 1234 | 1256 |