CAZyme Information: MGYG000001512_01572

Basic Information

• Species: Coprobacter secundus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter secundus
• CAZyme ID: MGYG000001512_01572
• CAZy Family: GH146
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1298		143751.95	4.9882

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001512	4253015	Isolate	not provided	not provided

• Gene Location: Start: 731606; End: 735502 Strand: -

Full Sequence      

MKKNIIVILIAGGVGFSLSAQRICDPLFTEYPNSGINMEALQANPVNGAAYVGDFNEDGL
SDILIMGPNYEEDSRNYITLLANNEGKSFTRNVLSMSGVSSGLANGSITATRVDSKKYLV
ALQGGTTSPATASNSKAMVGLLQYVTSSRVKFTKLQELDYGLYKGDILFIDLNKDGAPDI
VQFGGGKKVYAYLNDGNNTFTLSTEVAGLKGTVDGKAVVCDVNNDGIDDILSVDQQNGLM
VYLNSGNNSFTATKVSSRYSFKRSPRIATGDFDKDGNVDIVAFDTDGMTGKNSVAFFYGK
GDGEFEETSENKFEGVDAAAVAVADFNNDGNLDVLYSGCNYKVNSEDEKGDYTAKAYILL
GDGNRNFASQVKSTPKGYNPDIFTLSPILKGCYLTGNFDGDGKPDILALGTLGNTIAGKT
TRQADLFYSSASADFGTPIEDVIPNKWTSFPYSQVRLTDSRVKQAMDKEMAYLRSLEVNR
LFANTLKYNKGDNSYQCYGGWEEGGYGNSFAHYLSAVSMAYAATGDTEMLERANQCVDIM
ADCQDVMGDGLFSFADGTTWSFDKVAKAKNVELGKWDENGHPWDMNGQGIFLYGHHKVFA
CLRDAYIYTGNEKARISFLKLCDWVLGWIQNFDETNMQKILETEHGGMVEVLTDAYTLSG
KQKYLDGATRFLRKNFLDAMSNNRDDLSGRHSNFHIPMALGSAVYYRMTGNETNRLTAHN
FFHIVHDHHTLCNGGNGNNERFGTPNLLSYRLGMRGPETCSSYNMLKLAKELFCQEGSAD
YMDYYERTLYNHILATLSTHSDAGVCYYTSLKAGTFRMYDNLYNSFWCCVGTGMESHVKY
VDAIYFHKDDELMVNLYIPSTLSWKEKGLKLSMETTFPESDIIKLKVTENESFNGKLSFR
YPSWAEEGSLQIKVNGSQQKVLAKPGQLASIDGSWSAGTEIEITLPCRLRLEDIPDDVNV
SALFYGPVLLAGDMGEVGQLDVGGSVPSETIANPAPEAYFLDLKASRSQLDKWIERGEGL
TFTTKGLAHNYTLQPFYDIHHRRYSVYWKVGDDVDIEKSRELVPDYVLTGVTESEMEHNV
TSSGSNTGTADFSFWGPTYNRFRDASAAGFISYTLNLLPEELPQDKQYYLQLTYFGDEPD
GYGNFKIYVDGTEIASVGSITRLARLDFAQRYYPIPRNCTDGKQKITVKFSDGRLSLYGV
KLTTTDNLVEAKKDGENTPSAIFSEKIADSKSIWYNNGTLHIVADSDSTVRLFNSHGQII
WMNNNQKGHTAHSLDLPKGTYVVQCNLSKEIIRKKIII

Enzyme Prediction     

No EC number prediction in MGYG000001512_01572.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH146	454	971	9.9e-164	0.9980119284294234

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	9.59e-129	454	971	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.54e-81	455	1037	12	571	Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam13517	VCBS	2.32e-09	171	232	1	61	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).
pfam13517	VCBS	9.51e-09	221	282	1	61	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).
pfam16375	DUF4986	6.68e-06	1003	1048	32	84	Domain of unknown function. This family around 150 residues locates in the C-terminal of some uncharacterized proteins in various Bacteroides and Bacillus species. The function of this family remains unknown.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AND18711.1	4.96e-150	447	1207	39	795
ALA72776.1	4.96e-150	447	1207	39	795
AII66952.1	4.96e-150	447	1207	39	795
QJR53575.1	4.96e-150	447	1207	39	795
QUT86298.1	4.96e-150	447	1207	39	795

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YQH_AAA	8.03e-100	450	1120	28	725	ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A	1.66e-96	450	1120	28	725	Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.496897	0.402306	0.099885	0.000327	0.000235	0.000342

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001512_01572.