Species | Coprobacter secundus | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter secundus | |||||||||||
CAZyme ID | MGYG000001512_02169 | |||||||||||
CAZy Family | GH110 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 152533; End: 154482 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH110 | 57 | 540 | 3.5e-47 | 0.8321167883211679 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
TIGR04183 | Por_Secre_tail | 2.66e-06 | 584 | 648 | 6 | 71 | Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification. |
pfam18962 | Por_Secre_tail | 8.27e-05 | 584 | 648 | 6 | 72 | Secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber have on average twenty or more copies of this C-terminal domain, associated with sorting to the outer membrane and covalent modification. This domain targets proteins to type IX secretion systems and is secreted then cleaved off by a C-terminal signal peptidease. Based on similarity to other families it is likely that this domain adopts an immunoglobulin like fold. |
pfam13229 | Beta_helix | 0.004 | 400 | 532 | 8 | 110 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
BCI63954.1 | 0.0 | 1 | 649 | 1 | 649 |
BCI64360.1 | 1.09e-163 | 1 | 645 | 4 | 656 |
AXY78759.1 | 6.06e-111 | 17 | 554 | 6 | 535 |
QEC43188.1 | 9.45e-110 | 6 | 554 | 8 | 547 |
AFL78387.1 | 1.50e-108 | 19 | 554 | 19 | 547 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q8A2Z5 | 8.92e-11 | 62 | 467 | 93 | 478 | Alpha-1,3-galactosidase A OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaA PE=3 SV=1 |
Q89ZX0 | 4.20e-08 | 63 | 549 | 103 | 570 | Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.001444 | 0.828796 | 0.168957 | 0.000271 | 0.000257 | 0.000266 |
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