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CAZyme Information: MGYG000001513_00699

You are here: Home > Sequence: MGYG000001513_00699

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_P massiliamazoniense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P massiliamazoniense
CAZyme ID MGYG000001513_00699
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1092 119587.99 6.6951
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001513 3732600 Isolate not provided not provided
Gene Location Start: 514116;  End: 517394  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 912 1072 5.8e-23 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 7.59e-36 861 1091 48 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
COG3103 YgiM 5.63e-10 406 538 33 149
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
pfam08239 SH3_3 5.08e-09 323 371 3 53
Bacterial SH3 domain.
pfam08239 SH3_3 7.01e-09 757 806 3 54
Bacterial SH3 domain.
pfam08239 SH3_3 2.00e-08 575 623 3 53
Bacterial SH3 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXH52446.1 2.78e-158 66 1090 298 1297
SQI04537.1 7.32e-158 75 1090 121 1132
BAB80937.1 6.80e-157 75 1090 121 1127
ADA00360.1 6.80e-157 75 1090 121 1127
ALG48779.1 1.56e-155 75 1090 121 1132

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5WQW_A 3.39e-89 844 1090 21 269
X-raystructure of catalytic domain of autolysin from Clostridium perfringens [Clostridium perfringens str. 13]
6FXO_A 2.32e-27 882 1090 62 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 4.81e-17 897 1070 69 208
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 2.98e-16 897 1070 69 208
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 3.67e-13 849 1058 64 244
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5HQB9 4.06e-25 882 1090 1153 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
O33635 4.06e-25 882 1090 1153 1334
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
P39848 1.90e-24 744 1090 627 879
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q8CPQ1 2.08e-24 882 1090 1153 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q99V41 5.94e-24 882 1090 1066 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.006909 0.439424 0.552389 0.000422 0.000430 0.000400

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001513_00699.