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CAZyme Information: MGYG000001513_00935

You are here: Home > Sequence: MGYG000001513_00935

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_P massiliamazoniense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P massiliamazoniense
CAZyme ID MGYG000001513_00935
CAZy Family CBM2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
631 MGYG000001513_10|CGC1 69058.54 4.8869
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001513 3732600 Isolate not provided not provided
Gene Location Start: 97351;  End: 99246  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001513_00935.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM2 467 561 7.9e-18 0.9405940594059405

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd06543 GH18_PF-ChiA-like 2.90e-87 58 370 1 294
PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
pfam16403 DUF5011 4.12e-18 385 455 3 71
Domain of unknown function (DUF5011). This small family of proteins is functionally uncharacterized. This family is found in Bacteroides, Prevotella, and Parabateroides. Proteins in this family are around 230 amino acids in length.
cd12214 ChiA1_BD 6.99e-14 588 629 2 43
chitin-binding domain of Chi A1-like proteins. This group contains proteins related to the chitin binding domain of chitinase A1 (ChiA1) of Bacillus circulans WL-12. Glycosidase ChiA1 hydrolyzes chitin and is comprised of several domains: the C-terminal chitin binding domain, an N-terminal and catalytic domain, and 2 fibronectin type III-like domains. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. Bacillus circulans WL-12 ChiA1 facilitates invasion of fungal cell walls. The ChiAi chitin binding domain is required for the specific recognition of insoluble chitin. although topologically and structurally related, ChiA1 lacks the characteristic aromatic residues of Erwinia chrysanthemi endoglucanase Z (CBD(EGZ)).
pfam00553 CBM_2 7.44e-12 468 562 5 100
Cellulose binding domain. Two tryptophan residues are involved in cellulose binding. Cellulose binding domain found in bacteria.
smart00637 CBD_II 7.84e-10 471 560 1 90
CBD_II domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AQM58882.1 4.10e-201 2 455 5 461
AIY82478.1 6.66e-200 2 455 5 461
CDH91379.1 5.77e-189 38 509 64 533
ACD22750.1 5.77e-189 38 509 64 533
AIY82117.1 7.51e-187 38 509 64 533

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2DSK_A 4.54e-22 56 372 8 292
Crystalstructure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus [Pyrococcus furiosus],2DSK_B Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus [Pyrococcus furiosus]
3A4W_A 2.76e-21 56 372 8 292
Crystalstructures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3A4W_B Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus]
3A4X_A 5.03e-21 56 372 8 292
Crystalstructures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3A4X_B Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3AFB_A Crystal structures of catalytic site mutants of active domain 2 of chitinase from Pyrococcus furiosus [Pyrococcus furiosus],3AFB_B Crystal structures of catalytic site mutants of active domain 2 of chitinase from Pyrococcus furiosus [Pyrococcus furiosus]
2KPN_A 2.76e-15 374 455 2 83
SolutionNMR structure of a Bacterial Ig-like (Big_3) domain from Bacillus cereus. Northeast Structural Genomics Consortium target BcR147A [Bacillus cereus ATCC 14579]
1ED7_A 5.57e-10 588 631 2 45
ChainA, CHITINASE A1 [Niallia circulans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P13656 1.33e-29 55 371 584 880
Probable bifunctional chitinase/lysozyme OS=Escherichia coli (strain K12) OX=83333 GN=chiA PE=1 SV=2
O74199 7.64e-29 55 350 233 509
Endochitinase 11 OS=Metarhizium anisopliae OX=5530 GN=chi11 PE=1 SV=1
P14529 3.79e-19 90 368 64 320
Chitinase OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) OX=405948 GN=chiA2 PE=1 SV=2
P27050 2.51e-07 581 629 27 75
Chitinase D OS=Niallia circulans OX=1397 GN=chiD PE=1 SV=4
P20533 6.78e-07 588 631 656 699
Chitinase A1 OS=Niallia circulans OX=1397 GN=chiA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000550 0.998503 0.000246 0.000265 0.000204 0.000183

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001513_00935.