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CAZyme Information: MGYG000001514_02639
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus_A ihumii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A ihumii | |||||||||||
| CAZyme ID | MGYG000001514_02639 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1209525; End: 1210982 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 204 | 460 | 4.6e-38 | 0.7292307692307692 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00295 | Glyco_hydro_28 | 1.72e-09 | 231 | 434 | 88 | 281 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| COG5434 | Pgu1 | 9.83e-09 | 238 | 452 | 248 | 493 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02793 | PLN02793 | 1.16e-08 | 210 | 429 | 152 | 367 | Probable polygalacturonase |
| PLN03003 | PLN03003 | 4.24e-08 | 211 | 354 | 123 | 256 | Probable polygalacturonase At3g15720 |
| PLN03010 | PLN03010 | 7.41e-07 | 210 | 319 | 148 | 243 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QOS79397.1 | 1.07e-232 | 1 | 481 | 1 | 477 |
| QYR23224.1 | 3.89e-231 | 6 | 484 | 5 | 478 |
| AIQ48556.1 | 5.73e-231 | 1 | 481 | 1 | 477 |
| QYR23068.1 | 1.05e-228 | 6 | 481 | 6 | 476 |
| AFH60350.1 | 2.83e-228 | 6 | 484 | 6 | 480 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9FY19 | 3.13e-09 | 207 | 429 | 168 | 374 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
| Q9LW07 | 6.28e-08 | 208 | 472 | 120 | 367 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| Q7M1E7 | 2.62e-06 | 231 | 433 | 186 | 377 | Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1 |
| A2RAY7 | 3.99e-06 | 237 | 430 | 158 | 365 | Putative galacturan 1,4-alpha-galacturonidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxC PE=2 SV=1 |
| A2QW66 | 7.14e-06 | 241 | 392 | 182 | 338 | Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000049 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |