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CAZyme Information: MGYG000001514_04992

You are here: Home > Sequence: MGYG000001514_04992

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_A ihumii
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A ihumii
CAZyme ID MGYG000001514_04992
CAZy Family CBM66
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
626 66406.76 6.0681
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001514 5923787 Isolate not provided not provided
Gene Location Start: 3801961;  End: 3803841  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001514_04992.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 241 613 7.7e-139 0.9893333333333333
CBM66 54 211 5.8e-23 0.9870967741935484

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 4.70e-08 329 521 2 157
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13385 Laminin_G_3 1.25e-04 102 191 25 109
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
smart00282 LamG 7.26e-04 120 188 21 86
Laminin G domain.
pfam02210 Laminin_G_2 0.005 114 181 12 73
Laminin G domain. This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKS46472.1 3.30e-287 37 626 4 590
CQR55664.1 6.09e-285 32 625 24 645
QYR21238.1 4.66e-250 42 625 9 603
APO48380.1 2.50e-239 240 626 16 402
QZN75200.1 2.51e-239 240 626 73 459

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 4.08e-54 245 616 18 379
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 1.47e-17 245 528 6 322
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]
4AZZ_A 6.58e-06 54 216 8 165
Carbohydratebinding module CBM66 from Bacillus subtilis [Bacillus subtilis],4AZZ_B Carbohydrate binding module CBM66 from Bacillus subtilis [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A7 4.06e-53 245 616 43 404
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P0C1A6 4.01e-52 245 616 43 404
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P22751 1.08e-43 243 546 390 667
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000759 0.998425 0.000246 0.000204 0.000165 0.000156

TMHMM  Annotations      download full data without filtering help

start end
21 43