CAZyme Information: MGYG000001518_02802

Basic Information

• Species: Gorillibacterium timonense
• Lineage: Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Gorillibacterium; Gorillibacterium timonense
• CAZyme ID: MGYG000001518_02802
• CAZy Family: CBM32
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2541	MGYG000001518_7|CGC2	274552.43	4.4636

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001518	5263339	Isolate	not provided	not provided

• Gene Location: Start: 248984; End: 256609 Strand: +

Full Sequence      

MRKKWLSLVCVTALAGSLVPVMPERAAAEPVSIPARTISQISIPGISAFPNQPAPYQYMD
WKQRARDYDAFVYDWNKTSEFPTIKWDTTHYNLPYNTFKLPSYYGDDRLELDGDQEAVNL
MGSVAGATLVGVDKSNQDGNNYVDLIRTFMQTDNNRNLFFNWAKSDHTRNQTDWWYDLAP
NLLYYIIAEQYPNEPHADEYRTKIADALYKMTVSLGGENANFWHQSFDHDKQTPVDSSWT
VPEGGVISSLVQYWEYMRTGDSKYLDAAKWGMNYFNDIGSNPYYEVGAVFAPYIAARMNA
EQGTDYDLNHLFQWILSGSNVRGGWGTLQESWNGYDVYGLQGSRNDGGGYAFLMNTFATA
FFAPTVKYDPRYADTVGKWLLNVSNAARFFYADQMPQDKQYYGTQYQNAPEHVIAYEGLR
KSENGQSPRATGDPEKFWQQWGVSDTTTNLGLYGSGWAGFFGALFEKTNVEKILQIDLNT
LDFYKKESYPTYLYYNPYGENKSVEIALDSSSDLFDVISGQYVAKGVNGTQSFTVSAGHS
VVLVVAPAASSLRYDGSKTLINDKVVAYADLDTNLALGKTASVSSNDGFTASNAVDGNDS
TRWASKGTDSEWISVDLGGTYTIDRVRLKWEAAYGKMYKIQVSDDAATWKDVYTVENGNG
GIDDLSFDPVQAKYVRMLGTKRGTNYGYSLYEFEVYGPQAVAPSAPSGLTASADNGRVQL
KWNAVLSAETYEIYRYQGESAPTDPTAWTQVQSGVTGTSSTVEGLEYGKPYFFAVKAVNA
NGSSALSNAAAIMLRETDKVIGTVNLSGDPMFDSDSIANSLSNQWRWLSYPGARFSLNPN
QSGVGIDANKAPMSKDLAFNIGGFLGPEQIQYFGLMNAQIAASGQSGSAAASVSTTWYPY
KIDFNASYSTPSGVKVQGYDYFTDADSSVVRVLQVNGTGDMDLILGGTVDNNGTASWDAA
KQALVVTGPSYAYALTFAELTGEDLTASPLGLAPVVSGNTWSLRIPVGTVSGRTFAVGFG
FAPVEEGTDTAVTRSARNFERSVKSSLADTKQVFDTYLRKVPAPQTFGIPAGIDSRGVTA
AQHRMFYYGAFAFFLNNYMNVLPENTAYFNYPQVVLGKASTWGFGAPYNKGSVAWESFLG
QQWLSYMMPRQAWEAYVGTMSLVGEDGYIPGEVLPARKAQAAWVIYQNGGAAKEELAQEY
PAIRRNLLWLEQNPRWIYIGHDNSDEKDVEFMASFLFDADFAIRIAREIGMPDSEIAMWE
AHKTHVEKDIREWFLTNPNKLNQYYFLNSKSFWLGENESILNALYSNSLTTAETRMLMDF
WRGMANANAPVNGQLFKYGVMSVNVYTMLNKGLKGDARQIVYTAIRDTIKAGNFSENIQA
GGNVEGVSPSTFTAAAMIDFTLMANQLETYTGEPRAIDLGTSWGETALPDVEDFTYGSDW
TMGKNASLTVEDGIGTITVLPNATEDWGHVAKRLSYNVSDHPTLTVKVTKVSDGGKWALK
VSDGGDDITVQGDTNQSGEFTYDLKALTGWSGSKLFTVRLFAAGGKGKSFQIDYLATDKL
PTSELIPDKQGYVLGQPIQISYKVAAEGQYRIGIMKDDGIDPSESNEPLVVENAGNLLSG
TVRFTVDLPPGDYRVVLLEGNSYAVVATAPFKLFEPNAPSQVELRVGVSGKGWMKGKVTV
TPPQNLTYVEDYVLYWGGPAGRLTELPPVAVIPGADGAVSIELPETPIPDGAVGILAYSR
TKGFESLAYVEDELPGPGLQPIPLTDWTQLSDWTEKNAKVETADGAGRVTVTGSDYGYVG
KLMSYNVTDYPIIRVKVDSVDSGAKWAIKLNTGYSFNKDIVLQADTDQSGELSFDLRKIS
GWKGQRTFSFMLYAAGGQGKGFSISELTALPAVVLDEEPQPTVPQAPIGVHAAGGDGMAM
IGFAAPEDNGGSEIVKYVVTAWHDGAEVGKVEGTASPIAFTGLTNGEVYTFTVTAVNAQG
ESPASAPSNEVTPSADLPPVPAAPVNLTGAAGDGEVKLSWDSSADAVSYAVYQYEGTAAP
ADPADWTLLTSSVTAATYTVTGLTNGTSYAFAVKAVNAAGESDFSNVTVAVPEAAVQPEA
PAAPQNLTGTAGNGSAALTWNAIAGADHYSVYRYKGGVPADPGSWELIQAGITATGYTVT
GLTNGTSYAFAVTAVNAAGESVLSNMAVVAPAAPVTPDNGGNTGGTGTGSSESSTVTSTN
GSIVIPNGKSGEVSLGSEVTVSLPIGAANGELRVIIERLAAEAVPQADQGAFVSSVYEMT
KNVPGLFRKSVTITMKFDPTRVGADQRAAIFYYDEEKKEWVEVGGVVNGEWITAVVNHFT
KFAVLAVGEKTVEPEPEQPVVTFTDIAGHWGENAIRNAAGKKLITGYPDGTFKPNGAITR
EEFTVMLAKALGLKASGSTLSFADEAKIGAWAKEAVAQAMEAGIVSGYKDGSFRPNERIT
RAEMATMIARALKLPLEAQVATSFADDAAIPQWAKAAVEAMYQLGIVNGRSSDKFVPNDT
ATRAEAVTMLMRVLENIETTK

Enzyme Prediction     

No EC number prediction in MGYG000001518_02802.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM32	581	694	2.6e-30	0.9274193548387096

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00754	F5_F8_type_C	5.23e-26	580	692	3	125	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
NF033190	inl_like_NEAT_1	8.37e-19	2339	2530	559	748	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
cd00057	FA58C	4.51e-16	580	697	15	143	Substituted updates: Jan 31, 2002
NF033190	inl_like_NEAT_1	1.07e-13	2314	2473	573	753	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033190	inl_like_NEAT_1	7.06e-11	2420	2535	580	692	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMV41393.1	3.54e-202	1877	2535	1580	2235
QFU97473.1	8.62e-133	7	700	10	839
QNK59241.1	1.34e-65	2211	2535	1134	1459
BBI31951.1	1.74e-61	2209	2538	1212	1535
QAV19712.1	2.91e-61	2220	2532	1207	1514

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2RV9_A	2.29e-38	574	697	7	136	Solutionstructure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]
4ZXE_A	2.37e-38	574	697	8	137	X-raycrystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_B X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_C X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis]
4ZY9_A	4.40e-38	574	697	8	137	X-raycrystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZY9_B X-ray crystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]
2RVA_A	8.28e-31	574	697	7	137	Solutionstructure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]
4ZZ5_A	8.54e-31	574	697	8	138	X-raycrystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ5_B X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_A X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_B X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38536	8.91e-28	2265	2535	1593	1856	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38535	1.06e-23	2361	2535	906	1082	Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P19424	1.44e-18	2355	2534	33	214	Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
C6CRV0	2.76e-17	2291	2533	1219	1458	Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
Q06853	1.41e-16	2361	2472	523	638	Cell surface glycoprotein 2 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=Cthe_3079 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000295	0.999007	0.000182	0.000190	0.000157	0.000138

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001518_02802.