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CAZyme Information: MGYG000001522_01256

You are here: Home > Sequence: MGYG000001522_01256

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pauljensenia radingae_A
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Pauljensenia; Pauljensenia radingae_A
CAZyme ID MGYG000001522_01256
CAZy Family GH111
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1080 MGYG000001522_5|CGC3 115807.73 4.5229
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001522 2458350 Isolate not provided not provided
Gene Location Start: 346782;  End: 350024  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001522_01256.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH111 227 1006 2.5e-282 0.751937984496124

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12733 Cadherin-like 4.79e-11 251 325 10 87
Cadherin-like beta sandwich domain. This domain is found in several bacterial, metazoan and chlorophyte algal proteins. A profile-profile comparison recovered the cadherin domain and a comparison of the predicted structure of this domain with the crystal structure of the cadherin showed a congruent seven stranded secondary structure. The domain is widespread in bacteria and seen in the firmicutes, actinobacteria, certain proteobacteria, bacteroides and chlamydiae with an expansion in Clostridium. In contrast, it is limited in its distribution in eukaryotes suggesting that it was derived through lateral transfer from bacteria. In prokaryotes, this domain is widely fused to other domains such as FNIII (Fibronectin Type III), TIG, SLH (S-layer homology), discoidin, cell-wall-binding repeat domain and alpha-amylase-like glycohydrolases. These associations are suggestive of a carbohydrate-binding function for this cadherin-like domain. In animal proteins it is associated with an ATP-grasp domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SDU00779.1 0.0 1 1079 1 1079
QCT36061.1 0.0 21 995 18 1012
QGS10508.1 0.0 21 993 18 1008
EDN79875.1 0.0 21 1002 18 1017
AKU64455.1 0.0 7 995 6 1010

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000464 0.998567 0.000267 0.000333 0.000190 0.000161

TMHMM  Annotations      download full data without filtering help

start end
7 29
1049 1071