logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001523_03046

You are here: Home > Sequence: MGYG000001523_03046

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gracilibacillus massiliensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Gracilibacillus; Gracilibacillus massiliensis
CAZyme ID MGYG000001523_03046
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
672 MGYG000001523_13|CGC13 79530.59 4.7704
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001523 4207224 Isolate not provided not provided
Gene Location Start: 578590;  End: 580608  Strand: -

Full Sequence      Download help

MNKKAYWIWY  PGDWEIWLHE  KVSLRREMRE  VIFPPFWRLD  QHYSSVVFSY  QYELDQPEEV60
TIHVDGQFSV  YFDNKDNGRY  HDQIVTLPAG  KHEMKVAVYN  KENVPTIYID  GATIFSNDKW120
TVSCYDKQSR  KVGSWKKVLS  SPQTPPSKYQ  LETKLQSPIK  VDKINDGWFV  DFGKETFGFL180
QLNGIKGASK  VTVYYGESRA  EAEDRNHCVL  LDQVELDENT  DINYTFAKSR  AFRYVQVVSE240
SDDFNVESIQ  MHYEYLPVEY  RSHFRSSNQQ  LNQIWDTSLY  TFHLNTREFF  YDGIKRDRWV300
WSGDAYQSFL  MNYYSFVDPD  VVKRTLIALR  GKDPIVMHIN  TILDYSLYWF  TGIYDYYLYT360
GDIDFVKEQY  PHMVSLLDFC  LERRNEDGFM  EGKSEDWVFV  DWADIDNRGQ  VSTIQILLTR420
TLETMALVAD  IMNDKENTVS  YQKQADQLRE  STMKLFWDNE  QQGLVHQRYQ  GELQKKMTKY480
PNIFALLYDY  FDEEQKEKVK  NHVLMNKDVQ  SIKTPYMRFF  ELAALCEVGE  HHYVLDEMLD540
YWGGMLDLGA  TSFWEEYDPA  QTEEEHYQMY  DMKYGKSLCH  AWGASPIYLI  GKYLLGVKPL600
RPGYQEFIVE  PELGGLDWFE  GTIPVGEGEV  NIYMDQEQVK  VRSNFGKGLL  KLRNTNDVYD660
IPSDHSWLEI  RL672

Enzyme Prediction      help

EC 3.2.1.40

CAZyme Signature Domains help

Created with Snap3367100134168201235268302336369403436470504537571604638166639GH78
Family Start End Evalue family coverage
GH78 166 639 2.1e-110 0.9503968253968254

CDD Domains      download full data without filtering help

Created with Snap3367100134168201235268302336369403436470504537571604638264594Bac_rhamnosid6H340499GDE_C330460Glyco_hydro_36258457GDB1352460COG3459
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 8.94e-27 264 594 6 340
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam06202 GDE_C 1.96e-13 340 499 81 255
Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme AGL. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homolog GDB1 that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33).
pfam17167 Glyco_hydro_36 2.22e-05 330 460 112 250
Glycosyl hydrolase 36 superfamily, catalytic domain. This is the catalytic region of the superfamily of enzymes referred to as GH36. UniProtKB:Q76IQ9 is a chitobiose phosphorylase that catalyzes the reversible phosphorolysis of chitobiose into alpha-GlcNAc-1-phosphate and GlcNAc with inversion of the anomeric configuration. The full-length enzyme comprises a beta sandwich domain and an (alpha/alpha)(6) barrel domain. The alpha-helical barrel component of the domain, this family, is the catalytic region.
COG3408 GDB1 8.12e-05 258 457 234 462
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
COG3459 COG3459 0.001 352 460 677 805
Cellobiose phosphorylase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap33671001341682012352683023363694034364705045375716046381652QGQ95233.1|GH782672AYQ71539.1|GH787655AEI44466.1|GH784654QDH81526.1|GH787655AOW17855.1|GH78
Hit ID E-Value Query Start Query End Hit Start Hit End
QGQ95233.1 1.63e-277 1 652 1 651
AYQ71539.1 7.00e-265 2 672 7 680
AEI44466.1 1.24e-254 7 655 13 662
QDH81526.1 7.78e-251 4 654 28 690
AOW17855.1 8.40e-251 7 655 15 674

PDB Hits      download full data without filtering help

Created with Snap336710013416820123526830233636940343647050453757160463876543CIH_A1706282OKX_A2665934XHC_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CIH_A 1.18e-215 7 654 20 696
Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
2OKX_A 5.45e-37 170 628 441 910
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
4XHC_A 1.37e-35 266 593 211 541
ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3367100134168201235268302336369403436470504537571604638120631sp|T2KM26|PLH36_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KM26 8.03e-19 120 631 554 1109
Bifunctional sulfatase/alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22250 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001523_03046.