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CAZyme Information: MGYG000001523_03538
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gracilibacillus massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Gracilibacillus; Gracilibacillus massiliensis | |||||||||||
| CAZyme ID | MGYG000001523_03538 | |||||||||||
| CAZy Family | GH105 | |||||||||||
| CAZyme Description | Unsaturated rhamnogalacturonyl hydrolase YteR | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1181186; End: 1182280 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH105 | 28 | 357 | 7.3e-112 | 0.9728915662650602 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4225 | YesR | 1.17e-135 | 5 | 357 | 5 | 353 | Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism]. |
| pfam07470 | Glyco_hydro_88 | 6.08e-126 | 11 | 357 | 1 | 339 | Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases. |
| cd04791 | LanC_SerThrkinase | 7.46e-05 | 51 | 213 | 101 | 283 | Lanthionine synthetase C-like domain associated with serine/threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGH36553.1 | 6.90e-240 | 1 | 363 | 1 | 363 |
| BAC14042.1 | 1.09e-172 | 9 | 357 | 13 | 362 |
| ARK29546.1 | 7.56e-171 | 7 | 357 | 11 | 363 |
| QGI44699.1 | 1.58e-154 | 12 | 358 | 14 | 362 |
| AZN78357.1 | 1.58e-154 | 12 | 358 | 14 | 362 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1NC5_A | 2.26e-148 | 9 | 358 | 14 | 365 | Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis] |
| 2GH4_A | 9.18e-148 | 9 | 358 | 4 | 355 | ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis] |
| 4WU0_A | 3.44e-70 | 32 | 358 | 21 | 359 | StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824] |
| 3QWT_A | 2.07e-21 | 34 | 334 | 65 | 354 | ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A] |
| 3K11_A | 5.50e-16 | 135 | 356 | 199 | 409 | Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O34559 | 1.24e-147 | 9 | 358 | 14 | 365 | Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1 |
| P0A3U6 | 2.76e-35 | 142 | 353 | 1 | 224 | Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1 |
| P0A3U7 | 2.76e-35 | 142 | 353 | 1 | 224 | 24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1 |
| L7P9J4 | 3.38e-13 | 118 | 357 | 149 | 373 | Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1 |
| T2KPL9 | 5.03e-06 | 136 | 357 | 159 | 372 | Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000059 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |