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CAZyme Information: MGYG000001523_03803
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gracilibacillus massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Gracilibacillus; Gracilibacillus massiliensis | |||||||||||
| CAZyme ID | MGYG000001523_03803 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Anti-sigma-I factor RsgI6 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1473694; End: 1474926 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 82 | 355 | 3.1e-53 | 0.8481848184818482 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00633 | Glyco_10 | 3.25e-37 | 85 | 355 | 3 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 3.38e-30 | 85 | 350 | 69 | 321 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam00331 | Glyco_hydro_10 | 3.14e-29 | 85 | 353 | 46 | 306 | Glycosyl hydrolase family 10. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AYQ74416.1 | 5.44e-251 | 1 | 410 | 1 | 410 |
| ADK91076.1 | 1.12e-220 | 1 | 410 | 1 | 411 |
| SNX54660.1 | 4.32e-190 | 4 | 410 | 5 | 412 |
| QGU21441.1 | 9.51e-189 | 7 | 410 | 26 | 430 |
| AEF17756.1 | 2.99e-188 | 4 | 410 | 6 | 413 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7D88_A | 6.02e-38 | 7 | 388 | 53 | 395 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 7D89_A | 2.15e-36 | 7 | 388 | 53 | 395 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 3NIY_A | 7.49e-26 | 85 | 360 | 69 | 337 | Crystalstructure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NIY_B Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NJ3_A Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1],3NJ3_B Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1] |
| 1VBR_A | 1.05e-24 | 85 | 360 | 53 | 321 | Crystalstructure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBR_B Crystal structure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBU_A Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima],1VBU_B Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima] |
| 4W8L_A | 1.23e-20 | 49 | 355 | 14 | 341 | Structureof GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_B Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_C Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DH97 | 9.75e-26 | 10 | 405 | 392 | 750 | Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1 |
| Q60041 | 1.27e-22 | 85 | 360 | 72 | 340 | Endo-1,4-beta-xylanase B OS=Thermotoga neapolitana OX=2337 GN=xynB PE=3 SV=1 |
| O69230 | 1.12e-20 | 49 | 405 | 380 | 781 | Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1 |
| P23556 | 3.22e-20 | 70 | 334 | 42 | 310 | Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=xynA PE=1 SV=1 |
| P10474 | 1.18e-17 | 112 | 352 | 119 | 366 | Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000065 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |