CAZyme Information: MGYG000001525_00862

Basic Information

• Species: Paenibacillus_A rubinfantis
• Lineage: Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A rubinfantis
• CAZyme ID: MGYG000001525_00862
• CAZy Family: SLH
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1940		199514.32	4.253

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001525	5369528	Isolate	not provided	not provided

• Gene Location: Start: 194490; End: 200312 Strand: -

Full Sequence      

MIKRYVALLMVLLMIAEMIPAVASASSGASWTPRTSGTTSDLKGITYGNGQFVAAGVGGT
ILTSSDGSAWTDKTGDLSYQFNGITYGGGNYVAVGFGGAIITSTDADSWTFRTVGNSEVL
NGVAYGNGMYVAVGYSGKIFTSSDGNSWAGQTSGTPNTLYGVTYGGGMFVAVGQSGIILT
STDGVNWISRTSSTGVYLMGVTFGNGTYIAVGEFGTILTSDDSVNWKNLTLDEDNDFFGV
SYGNGSYATVTRQGSLLASNDGSSWSSQPSGTSNELTSVAYGNNAIVAVGGGGTVVQIDN
PTYALTYNSNGSTEGTAPSSVETYSEGALVTLPGNAGNLAKAGYTFVGWNTEADGSGANY
TAGMRLTMGAEPMTLYAKWTSGPAYTVTYDGNGSTGGTPPQIDHAFEPTAWVEVLENRGN
LVKAGHLFTGWNTMADGSGTSYAAGATFSLDGANVTLYAQWFLISTYTVSYNDNGSIGGT
VPTDSQVYEKNAVVTVAGNSGSLVKPGYLFTGWNTKADGSGISYASGATFNMGDADVQLY
AQWAPIPDWTTRTSGTSNDLKNVTYGNGKYVAVGDSGVILTSADGLVWTNQASSTSVQLN
DVTYGGDKYVALGNGGTILTSGDAASWTDHSVGGSQALRGIAYGKGMYVAVGDGGKIMTS
GDGDNWMIRTSGTDQDLYGVTYNGNGMFVAVGLQGSVLTSGNGADWSSQMSETDNLLAGA
TLGNGLYAAVGGLGTIVTSSNGADWAGQPSTTSVQLNGISYGNGSYVAAGRDGAILASND
GSSWKGQISGTTQSLNGVAYGDDSIVVVGDGGTILQISNPTYTVTYNGNGSTGGAVPVEG
ASYSVGAAVTILGNTGSLVKAGHTFVGWNTEADGSGTSYAAGLPFIMGAADVTLYARWTT
DFTYTVTYNGNGSTGGTVPAANAFEQGATVTVAGNTGDLAREGQEFTGWNTKADGSGMSY
AAGATFTVEGADVTLYAQWSTIPTFIVTYDGNGSEAGAVPADDQKYLKNAVVTVMGNTGA
LAKAGYRFTGWNTVANGTGTSYAAGATFRMRSSDMTLYAQWALATDWSPRNSGWSYDLKS
VMEDNFKFVAVGAFGILTSSDGVAWTVATWSPFYPQFNGFTTGNRGMFVAVGSGGAVLTS
LNQGANWTAQTVGDSEDLNSVTWGNGMFVAVGNSGRIFTSTDGSSWVGRTSGTSVDLNGV
IYDGDVMFVAVGDDGMILISPDGVTWSRRSTDTEAYLASVTYGRGLYVAVGGTGTILTST
DGDYWTVRRKNGLDNFNSVSYGNGSYVAVGSKGLVVESKDGIIWNSMESGTVTALYGVAH
GSGTVIAVGDAGTILQANPWFTVTYNGNGSTGGVVPAEASYPEGIVVTVPENEGNLVKAG
HTFTGWNTAANGSGTSYAPGATFKMGAANVTLYAQWASDSTYTVTYNGNGSTGGTVPTES
GAYEQNATVTVLGNTGSLVKSGHTFTGWNTAANGSGTSYAPGATFKMGAANVTLYAQWTT
NPTYTVTYNGNGSTGGTVPTESGAYEQNATVTVLGNTGSLVKAGHTFTGWNTAANGSGTS
YAAGATFKMGAANMTLYAQWTVSSGSDSGGGSGGTGGSGGSGGSGDPAPVPAGEGKVISE
NGEISLPAGKPGEVSLGATILIEIPANAADKDLKVTIKKLLDTQELLNDKDVLVSPIYEI
LKNSSGNFEKPVKLTFAFDSKRLTNNQKPSVFYFDEQDQVWVEVGGSISGNKITVEVNHF
TKFAVFAIEKEVVSPEDEPVLETKFSDISGHWAEASIKQAVRANLVRGYDDGTFKPGKAV
SRAEFAVMLMKALKPQGEAAALNFTDKATIGDWAQESVAQAVHAGVITGYEDGTFRPDAF
VTRAEMAVMVAKALKLPIETASATSFADDADIPTWASGAIAAINKIGIINGSADNRFLSS
NQATRAEAITVLLKMLEQSN

Enzyme Prediction     

No EC number prediction in MGYG000001525_00862.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
SLH	1824	1865	9.5e-16	0.9523809523809523

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033190	inl_like_NEAT_1	3.19e-23	1756	1927	573	743	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033189	internalin_A	1.05e-16	1364	1581	515	703	class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.
NF033189	internalin_A	5.14e-13	1378	1552	596	761	class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.
NF033190	inl_like_NEAT_1	2.21e-12	1762	1875	640	753	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033188	internalin_H	6.69e-12	1378	1541	374	525	InlH/InlC2 family class 1 internalin. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin H (InlH), or internalin C2, two class 1 (LPXTG-type) internalins that are closely related, one apparently derived from the other through a recombination event.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMV41393.1	2.11e-88	1619	1937	1917	2235
QNK59241.1	4.07e-65	1623	1937	1149	1459
QAV19712.1	4.66e-65	1621	1934	1207	1514
BBI31951.1	6.66e-63	1622	1933	1224	1528
QTH40658.1	1.44e-62	1615	1936	1374	1690

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6BT4_A	3.05e-12	1765	1938	26	198	Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis]
3PYW_A	3.11e-12	1765	1938	5	177	Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38536	2.43e-29	1666	1939	1601	1858	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P0DJ97	6.90e-28	1340	1583	429	661	Putative Gly-rich membrane protein Bcell_0380 OS=Evansella cellulosilytica (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) OX=649639 GN=Bcell_0380 PE=4 SV=1
P38535	1.95e-22	1765	1940	908	1085	Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
C6CRV0	1.32e-16	1733	1935	1264	1458	Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P0DJ98	2.63e-15	1341	1757	154	594	Putative membrane protein Bcell_0381 OS=Evansella cellulosilytica (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) OX=649639 GN=Bcell_0381 PE=4 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000208	0.999101	0.000174	0.000178	0.000154	0.000146

TMHMM  Annotations     

start	end
5	27