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CAZyme Information: MGYG000001525_04836

You are here: Home > Sequence: MGYG000001525_04836

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_A rubinfantis
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A rubinfantis
CAZyme ID MGYG000001525_04836
CAZy Family GH11
CAZyme Description Endo-1,4-beta-xylanase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
210 MGYG000001525_20|CGC30 22962.38 9.8176
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001525 5369528 Isolate not provided not provided
Gene Location Start: 1427939;  End: 1428571  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8 3.1.1.72

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 30 208 2.4e-71 0.9830508474576272

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00457 Glyco_hydro_11 8.26e-88 30 206 3 175
Glycosyl hydrolases family 11.
PRK06215 PRK06215 0.002 1 134 9 167
hypothetical protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AKJ70928.1 1.99e-146 1 210 1 210
AAB72117.1 3.17e-143 1 210 1 210
ALP35915.1 6.35e-141 2 210 3 211
QOS78966.1 6.35e-141 2 210 3 211
AYB44081.1 9.02e-141 2 210 3 211

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7KV0_A 7.11e-129 28 210 4 186
ChainA, Endo-1,4-beta-xylanase [Paenibacillus xylanivorans],7KV0_B Chain B, Endo-1,4-beta-xylanase [Paenibacillus xylanivorans]
1XXN_A 6.04e-123 27 210 1 185
Crystalstructure of a mesophilic xylanase A from Bacillus subtilis 1A1 [Bacillus subtilis],2DCY_A Crystal structure of Bacillus subtilis family-11 xylanase [Bacillus subtilis],2DCY_B Crystal structure of Bacillus subtilis family-11 xylanase [Bacillus subtilis],2DCY_C Crystal structure of Bacillus subtilis family-11 xylanase [Bacillus subtilis],2DCY_D Crystal structure of Bacillus subtilis family-11 xylanase [Bacillus subtilis],2DCY_E Crystal structure of Bacillus subtilis family-11 xylanase [Bacillus subtilis]
1BVV_A 1.73e-122 27 210 1 185
ChainA, ENDO-1,4-BETA-XYLANASE [Niallia circulans],1XNB_A Chain A, XYLANASE [Niallia circulans],2B42_B Crystal structure of the Triticum xylanse inhibitor-I in complex with bacillus subtilis xylanase [Bacillus subtilis],3HD8_B Crystal structure of the Triticum aestivum xylanase inhibitor-IIA in complex with bacillus subtilis xylanase [Bacillus subtilis],3HD8_D Crystal structure of the Triticum aestivum xylanase inhibitor-IIA in complex with bacillus subtilis xylanase [Bacillus subtilis]
2QZ3_A 4.96e-122 27 210 1 185
ChainA, Endo-1,4-beta-xylanase A [Bacillus subtilis],2QZ3_B Chain B, Endo-1,4-beta-xylanase A [Bacillus subtilis],2Z79_A Chain A, Endo-1,4-beta-xylanase A [Bacillus subtilis],2Z79_B Chain B, Endo-1,4-beta-xylanase A [Bacillus subtilis]
1HV0_A 7.04e-122 27 210 1 185
ChainA, ENDO-1,4-BETA-XYLANASE [Niallia circulans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P45705 6.33e-144 1 210 1 210
Endo-1,4-beta-xylanase A OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=3 SV=2
V9TXH2 5.74e-131 2 210 3 210
Endo-1,4-beta-xylanase Xyn11E OS=Paenibacillus barcinonensis OX=198119 GN=xyn11E PE=1 SV=1
P18429 1.44e-127 2 210 3 213
Endo-1,4-beta-xylanase A OS=Bacillus subtilis (strain 168) OX=224308 GN=xynA PE=1 SV=1
P09850 4.12e-127 2 210 3 213
Endo-1,4-beta-xylanase OS=Niallia circulans OX=1397 GN=xlnA PE=1 SV=1
Q9RI72 3.85e-80 24 209 55 239
Endo-1,4-beta-xylanase C OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=xlnC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000208 0.999146 0.000156 0.000169 0.000145 0.000134

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001525_04836.