dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001526_00442

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Basic Information help

Species

Paenibacillus_A senegalimassiliensis

Lineage

Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A senegalimassiliensis

CAZyme ID

MGYG000001526_00442

CAZy Family

CBM35

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
858		94815.12	4.0539

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001526	5059338	Isolate	not provided	not provided

Gene Location

Start: 102384; End: 104960 Strand: +

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.78

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH26	173	507	7.8e-95	0.9933993399339934
CBM3	715	795	1.5e-28	0.9772727272727273
CBM35	39	157	8.8e-26	0.9663865546218487

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam02156	Glyco_hydro_26	4.69e-48	173	507	2	311	Glycosyl hydrolase family 26.
cd04086	CBM35_mannanase-like	2.40e-35	34	158	1	119	Carbohydrate Binding Module 35 (CBM35); appended to several carbohydrate binding enzymes, including several glycoside hydrolase (GH) family 26 mannanase domains. This family includes carbohydrate binding module 35 (CBM35) domains that are appended to several carbohydrate binding enzymes, including periplasmic component of ABC-type sugar transport system involved in carbohydrate transport and metabolism, and several glycoside hydrolase (GH) domains, including GH26. These CBM6s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. Examples of proteins having CMB35s belonging to this family are mannanase A from Clostridium thermocellum (GH26), Man26B from Paenibacillus sp. BME-14 (GH26), and the multifunctional Cel44C-Man26A from Paenibacillus polymyxa GS01 (which has two GH domains, GH44 and GH26). GH26 mainly includes mannan endo-1,4-beta-mannosidase which hydrolyzes 1,4-beta-D-linkages in mannans, galacto-mannans, glucomannans, and galactoglucomannans, but displays little activity towards other plant cell wall polysaccharides. A few proteins belonging to this family have additional CBM3 domains; these CBM3s are not found in the CBM6-CBM35-CBM36_like superfamily.
pfam00942	CBM_3	6.35e-28	713	794	1	82	Cellulose binding domain.
pfam03442	CBM_X2	8.71e-28	615	697	1	83	Carbohydrate binding domain X2. This domain binds to cellulose and to bacterial cell walls. It is found in glycosyl hydrolases and in scaffolding proteins of cellulosomes (multiprotein glycosyl hydrolase complexes). In the cellulosome it may aid cellulose degradation by anchoring the cellulosome to the bacterial cell wall and by binding it to its substrate. This domain has an Ig-like fold.
pfam03442	CBM_X2	1.03e-23	522	604	1	83	Carbohydrate binding domain X2. This domain binds to cellulose and to bacterial cell walls. It is found in glycosyl hydrolases and in scaffolding proteins of cellulosomes (multiprotein glycosyl hydrolase complexes). In the cellulosome it may aid cellulose degradation by anchoring the cellulosome to the bacterial cell wall and by binding it to its substrate. This domain has an Ig-like fold.

CAZyme Hits help

Hit ID	Query Start	Query End	Hit Start	Hit End
AZK49093.1	1	858	1	857
ASR49482.1	1	857	1	858
APO46210.1	1	858	1	859
QOS82751.1	1	858	1	857
QZN74638.1	1	858	1	859

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3ZM8_A	3.64e-65	35	508	14	447	ChainA, Gh26 Endo-beta-1,4-mannanase [Podospora anserina S mat+]
3ZQW_A	8.06e-50	710	858	5	153	ChainA, CELLULOSOMAL SCAFFOLDIN [Acetivibrio cellulolyticus],3ZU8_A Chain A, Cellulosomal Scaffoldin [Acetivibrio cellulolyticus],3ZUC_A Chain A, CELLULOSOMAL SCAFFOLDIN [Acetivibrio cellulolyticus]
4JO5_A	4.45e-48	708	858	16	172	ChainA, Cellulosome anchoring protein cohesin region [Acetivibrio thermocellus YS]
1NBC_A	9.87e-48	710	858	1	155	ChainA, Cellulosomal Scaffolding Protein A [Acetivibrio thermocellus],1NBC_B Chain B, Cellulosomal Scaffolding Protein A [Acetivibrio thermocellus]
4B9F_A	2.88e-46	710	855	1	152	ChainA, Cellulosomal-scaffolding Protein A [Acetivibrio thermocellus ATCC 27405],4B9F_B Chain B, Cellulosomal-scaffolding Protein A [Acetivibrio thermocellus ATCC 27405]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P23659	3.03e-88	492	858	621	986	Endoglucanase Z OS=Thermoclostridium stercorarium OX=1510 GN=celZ PE=1 SV=1
Q3MUH7	7.85e-80	615	858	783	1027	Xyloglucanase OS=Paenibacillus sp. OX=58172 GN=xeg74 PE=1 SV=1
P50900	1.62e-69	586	858	649	914	Exoglucanase-2 OS=Thermoclostridium stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) OX=1121335 GN=celY PE=1 SV=2
G2Q4H7	5.61e-62	23	508	31	476	Mannan endo-1,4-beta-mannosidase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Man26A PE=1 SV=1
P55298	4.45e-53	60	514	41	465	Mannan endo-1,4-beta-mannosidase C OS=Piromyces sp. OX=45796 GN=MANC PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000405	0.998643	0.000230	0.000245	0.000235	0.000211

TMHMM Annotations download full data without filtering help

start	end
13	35