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CAZyme Information: MGYG000001529_02328

You are here: Home > Sequence: MGYG000001529_02328

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gabonibacter massiliensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Gabonibacter; Gabonibacter massiliensis
CAZyme ID MGYG000001529_02328
CAZy Family GT30
CAZyme Description 3-deoxy-D-manno-octulosonic acid transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
409 MGYG000001529_7|CGC9 46509.84 8.5956
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001529 3396579 Isolate not provided not provided
Gene Location Start: 1705360;  End: 1706589  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001529_02328.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT30 39 208 5.6e-48 0.9661016949152542

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1519 KdtA 2.38e-69 29 407 20 415
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
PRK05749 PRK05749 1.74e-63 29 407 21 417
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
pfam04413 Glycos_transf_N 5.16e-58 46 208 10 176
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.
COG2327 WcaK 0.001 133 356 112 328
Polysaccharide pyruvyl transferase family protein WcaK [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZS32062.1 1.42e-226 6 409 2 405
QRO50117.1 1.47e-226 6 409 3 406
ADY33207.1 3.05e-194 4 407 3 406
SNV38533.1 3.05e-194 4 407 3 406
BAX80324.1 1.30e-146 6 404 5 404

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2XCI_A 4.65e-30 42 376 34 344
Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q68XV7 1.26e-29 51 393 94 443
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=waaA PE=3 SV=1
O66663 1.79e-29 42 376 13 323
3-deoxy-D-manno-octulosonic acid transferase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=kdtA PE=1 SV=1
Q9ZE58 4.39e-29 51 393 92 441
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=waaA PE=3 SV=1
Q92JE9 3.60e-27 50 404 96 457
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=waaA PE=3 SV=1
Q4UND5 6.70e-27 51 405 97 458
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=waaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.364338 0.619201 0.013467 0.000983 0.000662 0.001330

TMHMM  Annotations      download full data without filtering help

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