CAZyme Information: MGYG000001533_01639

Basic Information

• Species: Corynebacterium ammoniagenes
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium ammoniagenes
• CAZyme ID: MGYG000001533_01639
• CAZy Family: CBM48
• CAZyme Description: 1,4-alpha-glucan branching enzyme GlgB

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
706	MGYG000001533_1|CGC13	80046.77	4.8225

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001533	2790185	Isolate	not provided	not provided

• Gene Location: Start: 1755091; End: 1757211 Strand: +

Full Sequence      

MSIPADDLHLLNQCRHFNPHGFYGWHDGTVHTRRPGAERVELVTSTDVLPMRNLGDDIFF
AELDEDQDYRLRITYPAQPPRDIADGYLFLPTLGSLDLHLISEGRHERLWEVLGANLKTY
PSELGEITGTAFAVWAPNAEGVSVVGDFCGWNAAQYPMRSLGSTGIWEVFIPGVGAGERY
KFAIHTKDGHRIDKADPMARKTLAPPETASVIETSDYQWTDGEWINSRTTDLDVPMSVYE
VHVGSWKQGSNYATLQEELIPYLLEHGFTHVELMPVAEHPFGGSWGYQVSSYYAPSARWG
NPDDLRSLIDALHNAGIGVIVDWVPAHFPKDSFSLGKFDGQACYEHPDPRRGEQQDWGTY
VFDFGRNEVRNFLVANALYWAEEFHIDGLRVDAVASMLYLDYSRDDWIPNVHGGRENLEA
VHFLQEANATLHRHHPGVLTIAEESTSWPGVTDSTENGGLGFNLKWNMGWMNDTLEYFGY
DPIHRSYHHNELTFSMVYAYSERYMLPFSHDEVVHGKGTLWTRMPGDDWNKAAGVRALFG
YMFSHPGKKLMFMGCEFGQTTEWSEAHSVDWSNLEGWGHEYHHGIKRLVRDLNHTYQQHP
ALWSQDFSQDGFQWVKADDANNSILGYVRYGTDGSVILAVCNFAGTSQPDYGMWVPEDGT
WELIFNTDDKAYEGAGNDLAQQITSADNSTNLHIPAQSVQWYKLQR

Enzyme Prediction     

EC	2.4.1.18

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH13	261	559	6e-157	0.9966777408637874
CBM48	113	204	1.9e-18	0.9210526315789473

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG0296	GlgB	0.0	88	704	1	628	1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK14706	PRK14706	0.0	117	699	27	616	glycogen branching enzyme; Provisional
PRK14705	PRK14705	0.0	16	676	516	1187	glycogen branching enzyme; Provisional
PRK12313	PRK12313	0.0	91	706	5	629	1,4-alpha-glucan branching protein GlgB.
PRK05402	PRK05402	0.0	3	706	1	725	1,4-alpha-glucan branching protein GlgB.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
APT82881.1	0.0	1	706	1	706
AQS73927.1	0.0	1	706	1	706
AHI20278.1	0.0	1	706	1	706
ASJ18969.1	0.0	1	705	1	705
AMJ44829.1	0.0	1	705	1	705

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3K1D_A	5.17e-300	4	676	7	686	Crystalstructure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV [Mycobacterium tuberculosis H37Rv]
5GR5_A	5.41e-218	2	675	24	737	Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQW_A	4.35e-217	2	675	24	737	Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GQZ_A	4.35e-217	2	675	24	737	Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A	6.15e-217	2	675	24	737	Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8FQ12	0.0	1	702	9	727	1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=glgB PE=3 SV=1
Q0SGR9	0.0	5	706	13	732	1,4-alpha-glucan branching enzyme GlgB OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=glgB PE=3 SV=1
Q6NHR6	0.0	3	703	10	729	1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=glgB PE=3 SV=1
Q8NR40	0.0	1	706	9	731	1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=glgB PE=3 SV=1
Q5Z0W8	5.29e-305	7	676	31	706	1,4-alpha-glucan branching enzyme GlgB OS=Nocardia farcinica (strain IFM 10152) OX=247156 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000068	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001533_01639.