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CAZyme Information: MGYG000001533_01837

You are here: Home > Sequence: MGYG000001533_01837

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium ammoniagenes
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium ammoniagenes
CAZyme ID MGYG000001533_01837
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
254 27392.22 4.1626
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001533 2790185 Isolate not provided not provided
Gene Location Start: 1967456;  End: 1968220  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001533_01837.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 101 246 1.9e-18 0.8074074074074075

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG2951 MltB 3.52e-28 79 252 111 289
Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis].
cd13399 Slt35-like 1.54e-21 98 245 1 108
Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
pfam13406 SLT_2 0.001 169 213 155 200
Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
APT83059.1 4.18e-188 1 254 1 254
APT95430.1 2.09e-169 2 252 19 269
ASJ19148.1 6.52e-169 1 252 1 252
AQX71464.1 4.92e-168 2 252 19 269
AMJ45015.1 8.16e-167 2 252 19 269

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.810758 0.186856 0.000900 0.000403 0.000295 0.000805

TMHMM  Annotations      download full data without filtering help

start end
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