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CAZyme Information: MGYG000001534_02355

You are here: Home > Sequence: MGYG000001534_02355

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Xanthomonas_B massiliensis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas_B; Xanthomonas_B massiliensis
CAZyme ID MGYG000001534_02355
CAZy Family GT83
CAZyme Description Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
554 60549.7 11.3918
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001534 3689702 Isolate not provided not provided
Gene Location Start: 316502;  End: 318166  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001534_02355.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 3 487 5.8e-86 0.8888888888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 4.70e-37 1 530 17 532
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
PRK13279 arnT 7.12e-13 17 316 31 324
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.
pfam13231 PMT_2 1.61e-05 48 183 2 136
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHB72309.1 4.29e-250 1 553 42 592
QDS18083.1 1.27e-247 4 550 25 575
ADV27992.1 1.57e-245 1 546 23 569
QEX76636.1 1.69e-245 4 550 25 575
QWN01528.1 2.40e-245 4 550 25 573

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5EZM_A 2.33e-12 9 337 49 372
CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9HY61 7.19e-23 17 331 30 336
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=arnT PE=3 SV=1
A6V1N8 5.43e-22 17 332 30 337
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas aeruginosa (strain PA7) OX=381754 GN=arnT PE=3 SV=1
Q02R27 5.43e-22 17 331 30 336
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=arnT PE=3 SV=1
B7VBN0 7.25e-22 17 331 30 336
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas aeruginosa (strain LESB58) OX=557722 GN=arnT PE=3 SV=1
Q4KC80 9.65e-21 17 323 30 328
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 1 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=arnT1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999898 0.000123 0.000019 0.000001 0.000000 0.000004

TMHMM  Annotations      download full data without filtering help

start end
63 85
123 140
155 177
190 212
257 279
286 305
309 331
338 360
375 397
404 426