logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001537_03623

You are here: Home > Sequence: MGYG000001537_03623

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cellulomonas timonensis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Cellulomonadaceae; Cellulomonas; Cellulomonas timonensis
CAZyme ID MGYG000001537_03623
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
218 24341.41 6.7592
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001537 4057828 Isolate not provided not provided
Gene Location Start: 979713;  End: 980369  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001537_03623.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00118 LysM 3.00e-08 166 213 1 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
pfam01476 LysM 1.81e-06 168 214 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
smart00257 LysM 1.63e-05 168 213 2 44
Lysin motif.
COG1652 XkdP 5.56e-05 167 215 212 263
Nucleoid-associated protein YgaU, contains BON and LysM domains [Function unknown].
COG4254 COG4254 2.05e-04 168 214 8 54
Uncharacterized conserved protein, contains LysM and FecR domains [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDB80729.1 1.13e-124 1 218 1 218
SDS70720.1 1.27e-123 5 218 4 217
QOR70360.1 9.40e-120 4 218 6 220
SOD70945.1 1.45e-118 1 217 1 217
QWC15632.1 5.18e-117 4 218 7 221

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7B5H_AK 1.22e-11 22 217 28 230
ChainAK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_BK Chain BK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_CK Chain CK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_DK Chain DK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_EK Chain EK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_FK Chain FK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418]
7AEB_M 1.98e-10 10 214 22 222
ChainM, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_N Chain N, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_O Chain O, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_P Chain P, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_Q Chain Q, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_R Chain R, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_M Chain M, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_N Chain N, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_O Chain O, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_P Chain P, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_Q Chain Q, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_R Chain R, LysM domain-containing protein [Algoriphagus machipongonensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P9WM38 1.92e-06 167 214 4 51
Esterase MT1326 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1326 PE=3 SV=1
P9WM39 1.92e-06 167 214 4 51
Esterase Rv1288 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv1288 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001537_03623.