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CAZyme Information: MGYG000001537_03623
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Cellulomonas timonensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Cellulomonadaceae; Cellulomonas; Cellulomonas timonensis | |||||||||||
| CAZyme ID | MGYG000001537_03623 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 979713; End: 980369 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd00118 | LysM | 3.00e-08 | 166 | 213 | 1 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
| pfam01476 | LysM | 1.81e-06 | 168 | 214 | 1 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
| smart00257 | LysM | 1.63e-05 | 168 | 213 | 2 | 44 | Lysin motif. |
| COG1652 | XkdP | 5.56e-05 | 167 | 215 | 212 | 263 | Nucleoid-associated protein YgaU, contains BON and LysM domains [Function unknown]. |
| COG4254 | COG4254 | 2.05e-04 | 168 | 214 | 8 | 54 | Uncharacterized conserved protein, contains LysM and FecR domains [General function prediction only]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QDB80729.1 | 1.13e-124 | 1 | 218 | 1 | 218 |
| SDS70720.1 | 1.27e-123 | 5 | 218 | 4 | 217 |
| QOR70360.1 | 9.40e-120 | 4 | 218 | 6 | 220 |
| SOD70945.1 | 1.45e-118 | 1 | 217 | 1 | 217 |
| QWC15632.1 | 5.18e-117 | 4 | 218 | 7 | 221 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7B5H_AK | 1.22e-11 | 22 | 217 | 28 | 230 | ChainAK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_BK Chain BK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_CK Chain CK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_DK Chain DK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_EK Chain EK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418],7B5H_FK Chain FK, All3321 protein [Nostoc sp. PCC 7120 = FACHB-418] |
| 7AEB_M | 1.98e-10 | 10 | 214 | 22 | 222 | ChainM, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_N Chain N, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_O Chain O, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_P Chain P, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_Q Chain Q, LysM domain-containing protein [Algoriphagus machipongonensis],7AEB_R Chain R, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_M Chain M, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_N Chain N, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_O Chain O, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_P Chain P, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_Q Chain Q, LysM domain-containing protein [Algoriphagus machipongonensis],7AEF_R Chain R, LysM domain-containing protein [Algoriphagus machipongonensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P9WM38 | 1.92e-06 | 167 | 214 | 4 | 51 | Esterase MT1326 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1326 PE=3 SV=1 |
| P9WM39 | 1.92e-06 | 167 | 214 | 4 | 51 | Esterase Rv1288 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv1288 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000060 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |