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CAZyme Information: MGYG000001538_01600

You are here: Home > Sequence: MGYG000001538_01600

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella ihuae
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella ihuae
CAZyme ID MGYG000001538_01600
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
750 81288.66 6.3206
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001538 2836446 Isolate not provided not provided
Gene Location Start: 256235;  End: 258487  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001538_01600.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 7 480 2.5e-180 0.9957627118644068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03791 GT5_Glycogen_synthase_DULL1-like 0.0 7 481 1 474
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
PRK00654 glgA 0.0 6 482 1 463
glycogen synthase GlgA.
COG0297 GlgA 0.0 8 482 3 478
Glycogen synthase [Carbohydrate transport and metabolism].
TIGR02095 glgA 0.0 6 482 1 473
glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PRK14099 PRK14099 1.95e-116 13 482 11 479
glycogen synthase GlgA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54860.1 8.32e-277 6 497 1 493
QIA34705.1 2.45e-275 6 495 1 491
AZH70577.1 8.02e-274 6 496 1 492
AEB07181.1 1.93e-255 1 509 1 502
QWT18297.1 3.08e-253 6 488 1 484

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4HLN_A 1.25e-91 1 479 120 622
Structureof barley starch synthase I in complex with maltooligosaccharide [Hordeum vulgare]
3D1J_A 1.55e-84 4 482 2 476
ChainA, Glycogen synthase [Escherichia coli]
2QZS_A 7.39e-84 4 485 2 479
CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12]
3COP_A 5.51e-83 4 485 2 479
ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli]
1RZU_A 6.34e-79 6 479 1 472
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B2V049 8.43e-156 6 479 1 472
Glycogen synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) OX=508767 GN=glgA PE=3 SV=1
B2TR28 1.68e-155 6 479 1 472
Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) OX=935198 GN=glgA PE=3 SV=1
B8G1G3 4.63e-155 6 483 1 464
Glycogen synthase OS=Desulfitobacterium hafniense (strain DSM 10664 / DCB-2) OX=272564 GN=glgA PE=3 SV=1
A6M334 6.94e-155 6 479 1 472
Glycogen synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=glgA PE=3 SV=1
A4J4I4 1.43e-154 6 479 1 471
Glycogen synthase OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000042 0.000020 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001538_01600.