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CAZyme Information: MGYG000001539_00614
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Acutalibacter timonensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Acutalibacter; Acutalibacter timonensis | |||||||||||
| CAZyme ID | MGYG000001539_00614 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 117858; End: 127268 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 1.54e-60 | 1829 | 2369 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| pfam18824 | LPD11 | 8.86e-30 | 1345 | 1411 | 1 | 69 | Large polyvalent protein-associated domain 11. This is an alpha-helical domain with conserved hydrophobic residues. It is found in polyvalent proteins of conjugative elements. |
| COG4646 | COG4646 | 7.08e-29 | 2510 | 2701 | 439 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| smart00487 | DEXDc | 1.16e-11 | 2313 | 2416 | 7 | 110 | DEAD-like helicases superfamily. |
| cd18011 | DEXDc_RapA | 2.93e-11 | 2315 | 2377 | 1 | 65 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 3.58e-312 | 1537 | 3113 | 1548 | 3197 |
| QIW86704.1 | 1.83e-309 | 1537 | 3107 | 1616 | 3259 |
| QIW86628.1 | 1.83e-309 | 1537 | 3107 | 1616 | 3259 |
| AEY69616.1 | 6.24e-303 | 1537 | 3125 | 1689 | 3353 |
| AXF51455.1 | 1.12e-301 | 1537 | 3125 | 1782 | 3446 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 2.45e-35 | 1555 | 2875 | 50 | 1555 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000045 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |