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CAZyme Information: MGYG000001539_01170

You are here: Home > Sequence: MGYG000001539_01170

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Acutalibacter timonensis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Acutalibacter; Acutalibacter timonensis
CAZyme ID MGYG000001539_01170
CAZy Family GH55
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
963 MGYG000001539_13|CGC1 107034.83 5.0597
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001539 3671397 Isolate not provided not provided
Gene Location Start: 191632;  End: 194523  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001539_01170.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH55 23 589 8.3e-74 0.7878378378378378

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12708 Pectate_lyase_3 3.21e-12 363 484 1 134
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708 Pectate_lyase_3 3.07e-10 39 203 16 172
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU28861.1 1.70e-313 11 963 11 980
QEM14394.1 3.68e-309 9 963 20 986
AYL99405.1 4.73e-299 9 963 24 996
AHW60618.1 2.70e-294 9 962 22 991
QUU00135.1 7.43e-284 19 963 35 1004

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3EQN_A 2.80e-11 58 668 91 722
ChainA, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000031 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001539_01170.