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CAZyme Information: MGYG000001539_01577

You are here: Home > Sequence: MGYG000001539_01577

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Acutalibacter timonensis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Acutalibacter; Acutalibacter timonensis
CAZyme ID MGYG000001539_01577
CAZy Family GH55
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
949 MGYG000001539_13|CGC7 105715.33 4.9471
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001539 3671397 Isolate not provided not provided
Gene Location Start: 683389;  End: 686238  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001539_01577.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH55 116 574 4.3e-67 0.6432432432432432

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12708 Pectate_lyase_3 7.07e-17 348 480 1 144
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708 Pectate_lyase_3 4.00e-10 24 233 16 213
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
COG5434 Pgu1 2.16e-04 349 399 83 137
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU28861.1 0.0 4 949 11 980
AHW60618.1 1.17e-294 4 947 24 990
AYL99405.1 5.08e-292 4 949 26 996
QEM14394.1 8.31e-291 4 948 22 985
QUU00135.1 9.79e-278 24 949 55 1004

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D4B0V1 7.61e-07 346 579 509 759
Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000072 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001539_01577.