CAZyme Information: MGYG000001539_01594

Basic Information

• Species: Acutalibacter timonensis
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Acutalibacter; Acutalibacter timonensis
• CAZyme ID: MGYG000001539_01594
• CAZy Family: GH55
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
976	MGYG000001539_13|CGC8	109550.07	4.9991

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001539	3671397	Isolate	not provided	not provided

• Gene Location: Start: 703854; End: 706784 Strand: -

Full Sequence      

MEEYRFARCGSIYPQQFDDPRAVVLQVDGLTPDENGICDVTDRLQSLLDSVKQHDRRGIV
LIPEGVYCISRTVYLPRAVRMIGFGKSRPRFVLKKNTPGFQKAPEGEKGEAVYLFWFTGN
MPAVEGTIQDANPGTFYSAVSNIDFKIEEGNPAAVVLRAHFAQHGFVSHCVFDIGEGKAG
IFDVGNEMENLVFLGGEYGIYTTKCSPGWPFVLVESAFKGQRTAGVLSRECGLTFSHVEF
SHMPAACVVEDGYWEKLFWKDCVLEQISEPALQISREDNSCTQINLRNVWCRDVPRLMRQ
KDSGREARGAKGAYWVSSLLHGDVFTLGEKEPQRETVLEAEPAGEIAPVFDREISDLPPQ
ETWRNVREFGAVGNGEVDDTEALQRALDQCAAVYLPQGTYRVTDTLHLREGGALIGLNPI
TTQLVLWENTSAWAGMGAPKAVLESCRGGYNLLSGVGIDTAARNPRAVGCKWMAGKGSYC
NDIKFVGGHGQITEQQENVPTYNPSRTADYDPDRPWDSQYWSLWITENGGGTFKDIWSAS
PYAEAGIFLSETSTPGVMYQVSVEHHVRHEILMRNVENWKFLGIQTEEEVAESSWCQPYE
LTNCRKLLFANFYAFRVIWVDNPYPSVVRAWNCQELEFLNCHNFTQMKYTMENLYQDGNT
GEKAGFWQLAKLSIPAVVPDGRLPTEKGLLRKLTGGLDCVDALCEDGKGNLYLCDSRLKR
IYRWDPESQRLTLLTSLHFRPLSLACDTQGRLLVVTEYKPVKGSVVNGREELSTDEFEGR
DGGGCYYPFFSMDRRVRVAVMDPDYPEDSLAVLPVVPIEEVNPQVLWYPANQWRDSGDMM
SSFSQRDTHCYPAPDGKTAVVHNPALARAVGLTPILPGKEIFLVDEYSKCVVEVHAEENF
TLTNPRISIQRGEYSCAVAEDGTLYVPDCLLYECRKGKKQRAILMEDRPSAVLIAGREKE
YLYITARCGFYALRLK

Enzyme Prediction     

No EC number prediction in MGYG000001539_01594.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	53	590	5.3e-70	0.7337837837837838

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam12708	Pectate_lyase_3	1.80e-12	363	472	1	121	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708	Pectate_lyase_3	2.42e-10	29	202	8	171	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
COG5434	Pgu1	6.01e-09	332	477	52	225	Polygalacturonase [Carbohydrate transport and metabolism].
cd05819	NHL	0.002	706	755	16	71	NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.
cd14962	NHL_like_6	0.003	702	756	61	117	Uncharacterized NHL-repeat domain in bacterial proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADU28861.1	0.0	11	975	11	980
QEM14394.1	3.20e-284	11	976	22	987
QUU00135.1	1.92e-279	11	976	27	1005
QBJ17509.1	1.19e-277	11	976	26	1004
QMI79027.1	2.38e-277	11	976	26	1004

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000056	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001539_01594.