logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001540_01060

You are here: Home > Sequence: MGYG000001540_01060

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium provencense
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium provencense
CAZyme ID MGYG000001540_01060
CAZy Family GT85
CAZyme Description Galactan 5-O-arabinofuranosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
706 MGYG000001540_1|CGC4 74964.99 7.6056
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001540 3078120 Isolate not provided not provided
Gene Location Start: 1120282;  End: 1122402  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001540_01060.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT85 20 452 1.8e-136 0.9297423887587822

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12250 AftA_N 2.73e-139 33 463 16 413
Arabinofuranosyltransferase N terminal. This domain family is found in bacteria, and is typically between 430 and 441 amino acids in length. This family is the N terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The N terminal region has been predicted to span 11 transmembrane regions.
pfam12249 AftA_C 1.69e-71 497 704 1 177
Arabinofuranosyltransferase A C terminal. This domain family is found in bacteria, and is typically between 179 and 190 amino acids in length. This family is the C terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The C terminal region is predicted to be directed towards the periplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWT27322.1 0.0 1 706 1 702
AGP29811.1 8.81e-204 6 704 7 662
AHW65534.1 7.80e-202 7 706 19 662
AEK38227.1 4.97e-197 8 704 37 691
QQC46814.1 4.10e-187 7 705 56 700

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NTW4 1.25e-121 31 705 41 660
Galactan 5-O-arabinofuranosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=aftA PE=1 SV=1
A0R611 2.74e-97 12 669 10 595
Galactan 5-O-arabinofuranosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=aftA PE=3 SV=1
P9WN02 1.44e-93 12 670 25 620
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=aftA PE=3 SV=1
P9WN03 1.44e-93 12 670 25 620
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=aftA PE=1 SV=1
Q7TVN5 1.44e-93 12 670 25 620
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=aftA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000043 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
15 37
50 72
100 122
155 172
177 199
206 225
271 293
314 336
369 391
398 420