You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001540_02375
You are here: Home > Sequence: MGYG000001540_02375
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Corynebacterium provencense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium provencense | |||||||||||
| CAZyme ID | MGYG000001540_02375 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | Choline oxidase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1126322; End: 1127941 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 18 | 536 | 6.5e-114 | 0.9894366197183099 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG2303 | BetA | 1.75e-92 | 12 | 538 | 2 | 535 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| PRK02106 | PRK02106 | 4.32e-86 | 18 | 539 | 6 | 534 | choline dehydrogenase; Validated |
| pfam05199 | GMC_oxred_C | 3.36e-39 | 392 | 532 | 1 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| pfam00732 | GMC_oxred_N | 1.59e-26 | 97 | 313 | 26 | 216 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| PLN02785 | PLN02785 | 2.43e-17 | 2 | 528 | 42 | 568 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QKX54836.1 | 7.43e-120 | 9 | 537 | 8 | 530 |
| ATQ35968.1 | 4.17e-119 | 9 | 537 | 8 | 530 |
| EAA64559.1 | 9.29e-118 | 9 | 537 | 8 | 530 |
| QGA17054.1 | 1.31e-117 | 18 | 537 | 15 | 530 |
| CAE7217204.1 | 1.91e-117 | 1 | 537 | 1 | 530 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2JBV_A | 2.73e-95 | 18 | 536 | 14 | 526 | Crystalstructure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
| 3NNE_A | 3.83e-95 | 18 | 536 | 14 | 526 | Crystalstructure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
| 3LJP_A | 1.07e-94 | 18 | 536 | 14 | 526 | ChainA, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
| 5NCC_A | 8.62e-55 | 3 | 539 | 13 | 579 | Structureof Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis] |
| 6YS1_AAA | 9.08e-55 | 18 | 539 | 8 | 563 | ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q7X2H8 | 1.49e-94 | 18 | 536 | 14 | 526 | Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1 |
| Q6LGH5 | 3.10e-58 | 18 | 538 | 5 | 532 | Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1 |
| Q9WWW2 | 3.15e-58 | 18 | 539 | 2 | 530 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1 |
| Q988C9 | 3.67e-58 | 18 | 537 | 7 | 534 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
| Q00593 | 9.39e-55 | 18 | 536 | 2 | 527 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999976 | 0.000047 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |