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CAZyme Information: MGYG000001540_02422
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Corynebacterium provencense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium provencense | |||||||||||
| CAZyme ID | MGYG000001540_02422 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | Choline oxidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1176979; End: 1178535 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 1 | 517 | 3.7e-95 | 0.5048543689320388 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK02106 | PRK02106 | 2.92e-158 | 1 | 517 | 2 | 532 | choline dehydrogenase; Validated |
| COG2303 | BetA | 2.46e-138 | 1 | 518 | 4 | 535 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| pfam05199 | GMC_oxred_C | 9.42e-43 | 373 | 512 | 2 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| pfam00732 | GMC_oxred_N | 1.11e-42 | 72 | 298 | 15 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| PLN02785 | PLN02785 | 1.34e-33 | 3 | 509 | 54 | 569 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGI77692.1 | 7.25e-138 | 2 | 516 | 11 | 530 |
| CCT64188.1 | 7.25e-138 | 2 | 516 | 11 | 530 |
| QGI60495.1 | 7.25e-138 | 2 | 516 | 11 | 530 |
| QGI91399.1 | 7.25e-138 | 2 | 516 | 11 | 530 |
| QKD52860.1 | 4.10e-137 | 5 | 516 | 14 | 530 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2JBV_A | 2.39e-249 | 3 | 518 | 12 | 528 | Crystalstructure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
| 3NNE_A | 6.82e-249 | 3 | 518 | 12 | 528 | Crystalstructure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
| 3LJP_A | 9.67e-249 | 3 | 518 | 12 | 528 | ChainA, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
| 6ZH7_A | 1.26e-76 | 3 | 516 | 6 | 560 | ChainA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
| 6YRU_AAA | 1.26e-76 | 3 | 516 | 6 | 560 | ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q7X2H8 | 1.31e-248 | 3 | 518 | 12 | 528 | Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1 |
| Q8NE62 | 7.50e-106 | 2 | 517 | 38 | 572 | Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2 |
| Q8BJ64 | 2.95e-102 | 2 | 517 | 40 | 574 | Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1 |
| Q6UPE0 | 5.90e-99 | 2 | 517 | 43 | 577 | Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1 |
| Q47944 | 7.22e-99 | 1 | 517 | 1 | 528 | L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999990 | 0.000036 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |