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CAZyme Information: MGYG000001542_00914

You are here: Home > Sequence: MGYG000001542_00914

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_A sp900069005
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A sp900069005
CAZyme ID MGYG000001542_00914
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
568 MGYG000001542_18|CGC2 60734.37 5.2145
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001542 5846629 Isolate not provided not provided
Gene Location Start: 146669;  End: 148375  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 46 313 2.3e-76 0.9075907590759076
CBM3 425 504 1.2e-21 0.9886363636363636

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3693 XynA 5.64e-98 33 320 30 345
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 9.80e-87 33 313 16 309
Glycosyl hydrolase family 10.
smart00633 Glyco_10 2.72e-77 65 312 2 263
Glycosyl hydrolase family 10.
pfam00942 CBM_3 1.33e-22 424 503 1 82
Cellulose binding domain.
smart01067 CBM_3 1.78e-18 424 504 1 83
Cellulose binding domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZS17860.1 0.0 1 568 1 568
QJD82069.1 3.37e-283 3 568 5 569
BAK22544.1 6.42e-283 3 568 5 577
QKS45670.1 1.02e-281 3 568 5 576
AVI01408.1 1.46e-182 2 319 4 321

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4PMY_A 4.72e-90 33 316 5 299
Crystalstructure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose [Xanthomonas citri pv. citri str. 306],4PMY_B Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose [Xanthomonas citri pv. citri str. 306],4PMZ_A Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylobiose [Xanthomonas citri pv. citri str. 306],4PMZ_B Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylobiose [Xanthomonas citri pv. citri str. 306]
4PN2_A 5.03e-90 33 316 6 300
Crystalstructure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylotriose [Xanthomonas citri pv. citri str. 306],4PN2_B Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylotriose [Xanthomonas citri pv. citri str. 306]
4PMX_A 5.20e-90 33 316 6 300
Crystalstructure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri in the native form [Xanthomonas citri pv. citri str. 306]
3ZQW_A 6.64e-40 421 568 5 153
ChainA, CELLULOSOMAL SCAFFOLDIN [Acetivibrio cellulolyticus],3ZU8_A Chain A, Cellulosomal Scaffoldin [Acetivibrio cellulolyticus],3ZUC_A Chain A, CELLULOSOMAL SCAFFOLDIN [Acetivibrio cellulolyticus]
6D5B_A 6.88e-35 424 568 21 167
Structureof Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_B Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_C Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_D Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_E Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_F Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_G Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_H Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_I Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_J Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_K Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_L Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P23030 3.93e-64 37 312 323 592
Endo-1,4-beta-xylanase B OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=xynB PE=1 SV=2
P29718 2.59e-56 424 568 1 145
Uncharacterized protein in celA 5'region (Fragment) OS=Paenibacillus lautus OX=1401 PE=4 SV=1
P29719 9.18e-48 421 568 552 700
Endoglucanase A OS=Paenibacillus lautus OX=1401 GN=celA PE=3 SV=1
P10474 6.89e-47 54 568 76 570
Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celB PE=3 SV=1
Q02934 3.00e-39 422 568 740 887
Endoglucanase 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celI PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000371 0.998540 0.000544 0.000198 0.000164 0.000146

TMHMM  Annotations      download full data without filtering help

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