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CAZyme Information: MGYG000001543_01805

You are here: Home > Sequence: MGYG000001543_01805

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnoclostridium sp900078195
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; Lachnoclostridium sp900078195
CAZyme ID MGYG000001543_01805
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1242 133502.67 9.0215
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001543 4599950 Isolate not provided not provided
Gene Location Start: 144978;  End: 148706  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001543_01805.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 1.43e-18 896 1133 45 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 6.19e-09 519 577 2 54
Bacterial SH3 domain.
pfam08239 SH3_3 1.87e-06 338 397 1 54
Bacterial SH3 domain.
pfam08239 SH3_3 2.83e-06 153 210 3 54
Bacterial SH3 domain.
pfam08239 SH3_3 9.44e-05 41 102 1 54
Bacterial SH3 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX43817.1 0.0 1 1240 17 1278
BCJ93456.1 5.45e-231 430 1240 60 894
BCN29841.1 5.76e-211 406 1240 35 888
CUH91961.1 1.61e-210 432 1240 53 911
QHQ61172.1 6.11e-210 405 1240 36 766

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 2.59e-10 969 1133 92 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8CPQ1 3.11e-11 899 1133 1128 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
O33635 7.02e-11 899 1133 1128 1334
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 7.02e-11 899 1133 1128 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q99V41 1.18e-08 969 1133 1096 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q6GI31 1.18e-08 969 1133 1105 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000259 0.999141 0.000162 0.000156 0.000138 0.000133

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001543_01805.