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CAZyme Information: MGYG000001543_02125
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnoclostridium sp900078195 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; Lachnoclostridium sp900078195 | |||||||||||
| CAZyme ID | MGYG000001543_02125 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 513254; End: 521401 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL9 | 1889 | 2269 | 6.8e-130 | 0.9786666666666667 |
| CE8 | 748 | 1125 | 4.1e-45 | 0.9513888888888888 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 1.93e-22 | 745 | 1099 | 84 | 374 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02708 | PLN02708 | 7.03e-20 | 744 | 1117 | 242 | 527 | Probable pectinesterase/pectinesterase inhibitor |
| PLN02497 | PLN02497 | 1.72e-19 | 874 | 1131 | 109 | 318 | probable pectinesterase |
| pfam01095 | Pectinesterase | 1.76e-18 | 747 | 1116 | 3 | 275 | Pectinesterase. |
| PLN02773 | PLN02773 | 8.82e-18 | 745 | 1122 | 6 | 285 | pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADL35206.1 | 0.0 | 171 | 2232 | 132 | 2398 |
| BCJ94249.1 | 0.0 | 1274 | 2712 | 179 | 1641 |
| AFK85374.1 | 0.0 | 171 | 1163 | 750 | 1740 |
| ABX44216.1 | 0.0 | 1323 | 2696 | 224 | 1418 |
| ACR71158.1 | 2.02e-241 | 1322 | 2276 | 616 | 1644 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1RU4_A | 1.13e-43 | 1889 | 2277 | 14 | 381 | ChainA, Pectate lyase [Dickeya chrysanthemi] |
| 5OLQ_A | 1.25e-17 | 1890 | 2173 | 3 | 325 | Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron] |
| 5C1E_A | 1.00e-13 | 746 | 1097 | 11 | 259 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
| 5C1C_A | 1.34e-13 | 746 | 1097 | 11 | 259 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
| 3UW0_A | 1.48e-09 | 843 | 1056 | 89 | 274 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P22751 | 2.87e-55 | 1504 | 2175 | 26 | 646 | Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1 |
| P0C1A6 | 9.75e-44 | 1889 | 2277 | 39 | 406 | Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1 |
| P0C1A7 | 1.09e-42 | 1889 | 2277 | 39 | 406 | Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1 |
| Q8L7Q7 | 2.58e-15 | 722 | 1121 | 273 | 580 | Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2 |
| A2QK82 | 3.24e-13 | 731 | 1097 | 13 | 287 | Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000219 | 0.999147 | 0.000163 | 0.000170 | 0.000145 | 0.000133 |
