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CAZyme Information: MGYG000001543_02554

You are here: Home > Sequence: MGYG000001543_02554

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnoclostridium sp900078195
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; Lachnoclostridium sp900078195
CAZyme ID MGYG000001543_02554
CAZy Family CBM3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2519 MGYG000001543_7|CGC14 280864 4.8627
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001543 4599950 Isolate not provided not provided
Gene Location Start: 1045649;  End: 1053208  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.151

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM3 700 774 2.4e-25 0.9090909090909091
CBM3 892 971 1.9e-22 0.9659090909090909
CBM3 1060 1134 8.3e-16 0.8181818181818182

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3209 RhsA 6.11e-45 1444 2173 1 716
Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only].
COG3209 RhsA 6.29e-43 1614 2359 3 692
Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only].
COG3209 RhsA 8.50e-41 1275 1998 1 651
Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only].
COG3209 RhsA 3.33e-37 1240 1914 50 672
Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only].
COG3209 RhsA 1.39e-27 1228 1829 198 793
Uncharacterized conserved protein RhsA, contains 28 RHS repeats [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCN29431.1 0.0 5 1251 7 1186
AZS13822.1 4.61e-94 6 1251 2 1043
BCJ98209.1 5.82e-65 687 1036 64 371
ACM60954.1 2.16e-63 700 1211 395 935
CDM70444.1 5.61e-55 886 1219 1 333

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3ZQW_A 9.01e-35 687 822 6 139
ChainA, CELLULOSOMAL SCAFFOLDIN [Acetivibrio cellulolyticus],3ZU8_A Chain A, Cellulosomal Scaffoldin [Acetivibrio cellulolyticus],3ZUC_A Chain A, CELLULOSOMAL SCAFFOLDIN [Acetivibrio cellulolyticus]
1G43_A 2.25e-30 882 1030 2 157
CrystalStructure Of A Family Iiia Cbd From Clostridium Cellulolyticum [Ruminiclostridium cellulolyticum]
6D5B_A 9.11e-29 700 809 29 139
Structureof Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_B Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_C Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_D Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_E Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_F Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_G Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_H Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_I Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_J Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_K Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5B_L Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]
4B97_A 6.18e-28 687 811 4 125
ChainA, Cellulose Binding Domain-containing Protein [Acetivibrio thermocellus ATCC 27405]
6XX1_C 4.78e-24 886 999 2 116
ChainC, Cellulose binding domain-containing protein [Acetivibrio clariflavus DSM 19732],6XX1_D Chain D, Cellulose binding domain-containing protein [Acetivibrio clariflavus DSM 19732]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22534 5.85e-48 700 1032 717 1057
Endoglucanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celA PE=3 SV=2
P22533 2.02e-47 700 1032 377 717
Beta-mannanase/endoglucanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=manA PE=1 SV=2
Q02934 3.89e-38 888 1032 741 886
Endoglucanase 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celI PE=1 SV=2
P23659 2.59e-36 883 1030 837 983
Endoglucanase Z OS=Thermoclostridium stercorarium OX=1510 GN=celZ PE=1 SV=1
P50900 3.96e-34 686 820 766 896
Exoglucanase-2 OS=Thermoclostridium stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) OX=1121335 GN=celY PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000315 0.998940 0.000203 0.000201 0.000162 0.000139

TMHMM  Annotations      download full data without filtering help

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