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CAZyme Information: MGYG000001546_00923

You are here: Home > Sequence: MGYG000001546_00923

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes provencensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes provencensis
CAZyme ID MGYG000001546_00923
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1037 MGYG000001546_5|CGC18 117974.69 5.9416
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001546 3805103 Isolate not provided not provided
Gene Location Start: 1141658;  End: 1144771  Strand: +

Full Sequence      Download help

MKKLFLTLLC  ACTAAGLRAQ  SNEWLDPAVN  EINRMQMHAA  FFAYESAYAA  RRGDRTASER60
FLNLDGTWKF  AWVRNADQRP  TDFFQPGFND  GAWGEMPVPG  MWELNGHGDP  QYLNIGYPWR120
EQFENNPPEV  PTAENHVGSY  RREIEIPAAW  SDKQIIARFG  SVTSNIYLWV  NGRFVGYSED180
SKLEAEFDIT  RFVKPGRNLI  AFQVFRWSDG  TYLEDQDFFR  LSGVGRACYL  YAREKRHIAD240
VRLDAALSEN  YTRGQLAVEL  ALPAAAKGCT  AEVTLTAPDG  RAVASETAKI  AGTTARLTLD300
AGKVQPWSAE  IPALYGVQVS  LKAPDGTEIE  VIPLHAGFRE  VKIEGGQLLV  NGQPVLIKGA360
NRHEMDPDGG  YVVSEKRMIE  DIRILKENNF  NAVRTCHYPD  DERWYALCDR  YGLYLVAEAN420
IESHGMGYDE  KTLAKNPAFA  RAHLERNQRN  VRRNINHPSV  IIWSLGNEAG  DGPNFDACYD480
WVKAYDPSRP  VHYERAVYNN  GGRNTDIVCP  MYWNYEQCEK  YLRNNPRKPL  IQCEYAHAMG540
NSLGGFREYW  ELIRKYPHYQ  GGFIWDFVDQ  SLRKTGKNGA  MIYGYGGDWN  PYDASDWNFC600
DNGLISPDRV  PNPHMHEARY  WQQPVWTTLG  ADRRTLTVFN  ENFFRPLDNC  YLRWTVLRDG660
EPVRSGIVAD  LRVAPQQNAT  VVLPYDPAQL  PAGGELLLNV  EYRLCDAEPL  LAPDHRVAYQ720
QFTLRAAEPA  PLAVAERMAD  RHNSIGTLTV  RDNDRNYLIV  ESPAARIDFR  RADGLVTRYE780
ADGMRLLDEG  AVVEPNFWRA  PTDNDFGAKL  NEKNRAWADP  GLKLLSLDHT  LSDGVAVVTA840
RYDFQRVTGR  LEIEYRIDNA  GEILIRQTLH  AAADKGEPDL  MRFGMRMRMP  AAYDRVDYYG900
RGPWENYADR  KDGALVGRYL  QTVDEQFYPY  IRPQETGTKS  DVRRWRQCDI  AGRGVEIVAE960
APFSASALHY  AQEALDEGLA  KKQGHSQEIE  PDDAVWLCID  KAQYGLGCIN  SWGALPIRKY1020
RMPYGNYEFR  FRITPVR1037

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap5110315520725931136241446651857062267472577782988193398550916GH2
Family Start End Evalue family coverage
GH2 50 916 5.4e-216 0.9747340425531915

CDD Domains      download full data without filtering help

Created with Snap51103155207259311362414466518570622674725777829881933985201012lacZ221036ebgA58918LacZ341625Glyco_hydro_2_C7611033Bgal_small_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 20 1012 13 1003
beta-galactosidase.
PRK10340 ebgA 0.0 22 1036 2 1000
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 3.49e-159 58 918 9 808
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 6.85e-103 341 625 1 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 1.04e-92 761 1033 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Created with Snap5110315520725931136241446651857062267472577782988193398511036BBL13663.1|GH211036BBL05221.1|GH261037BCI63005.1|GH281036ASM65244.1|GH281036QUU07076.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
BBL13663.1 0.0 1 1036 1 1037
BBL05221.1 0.0 1 1036 1 1037
BCI63005.1 0.0 6 1037 4 1035
ASM65244.1 0.0 8 1036 6 1030
QUU07076.1 0.0 8 1036 6 1030

PDB Hits      download full data without filtering help

Created with Snap511031552072593113624144665185706226747257778298819339852310336S6Z_A2310336SD0_A2010373DEC_A1610373BGA_A2010301JZ7_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 7.37e-219 23 1033 3 979
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 7.59e-219 23 1033 4 980
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 1.65e-206 20 1037 3 998
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 1.16e-202 16 1037 2 1002
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
1JZ7_A 2.09e-196 20 1030 12 1017
E.COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_B E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_C E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],1JZ7_D E. COLI (lacZ) BETA-GALACTOSIDASE IN COMPLEX WITH GALACTOSE [Escherichia coli],4TTG_A Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_B Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_C Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli],4TTG_D Beta-galactosidase (E. coli) in the presence of potassium chloride. [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Created with Snap51103155207259311362414466518570622674725777829881933985231033sp|Q56307|BGAL_THEMA231036sp|O52847|BGAL_PRIM3201030sp|A7ZI91|BGAL_ECO24201030sp|Q8FKG6|BGAL_ECOL6201030sp|Q0TKT1|BGAL_ECOL5
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 4.15e-218 23 1033 4 980
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 3.44e-205 23 1036 19 1034
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A7ZI91 3.86e-197 20 1030 13 1018
Beta-galactosidase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) OX=331111 GN=lacZ PE=3 SV=1
Q8FKG6 5.43e-197 20 1030 13 1018
Beta-galactosidase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=lacZ PE=3 SV=1
Q0TKT1 7.64e-197 20 1030 13 1018
Beta-galactosidase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001964 0.878652 0.118251 0.000457 0.000336 0.000324

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001546_00923.