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CAZyme Information: MGYG000001549_04213

You are here: Home > Sequence: MGYG000001549_04213

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gracilibacillus phocaeensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Gracilibacillus; Gracilibacillus phocaeensis
CAZyme ID MGYG000001549_04213
CAZy Family GH2
CAZyme Description Beta-galactosidase BoGH2A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
778 MGYG000001549_12|CGC21 89436.34 5.6318
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001549 4547476 Isolate not provided not provided
Gene Location Start: 2000195;  End: 2002531  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001549_04213.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 6 591 6e-119 0.613031914893617

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 2.53e-73 11 522 33 502
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 9.70e-50 66 517 68 553
beta-D-glucuronidase; Provisional
PRK10340 ebgA 1.25e-42 19 476 60 510
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam18565 Glyco_hydro2_C5 4.71e-37 668 769 1 102
Glycoside hydrolase family 2 C-terminal domain 5. Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme.
PRK09525 lacZ 5.59e-35 11 423 58 485
beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFC29249.1 1.23e-280 3 771 13 786
AFH61428.2 1.23e-280 3 771 13 786
AEI40632.1 7.02e-280 3 771 13 786
AQS57486.1 7.47e-276 2 770 1 773
ASR49194.1 1.64e-269 11 761 12 767

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6B6L_A 3.35e-177 4 771 6 775
Thecrystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838],6B6L_B The crystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838]
7RSK_A 1.46e-176 4 771 6 775
ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7RSK_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838]
4YPJ_A 8.35e-165 4 774 8 808
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
5T98_A 1.13e-161 6 772 28 819
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
7CWD_A 1.59e-159 20 771 21 799
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7LXS9 1.56e-176 3 767 42 842
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
T2KM09 5.18e-125 3 748 46 795
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
P77989 1.97e-73 1 763 1 738
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
T2KN75 1.14e-71 3 712 26 736
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
T2KPJ7 5.47e-55 3 753 51 818
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001549_04213.