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CAZyme Information: MGYG000001553_02281
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridium_P mediterraneense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P mediterraneense | |||||||||||
| CAZyme ID | MGYG000001553_02281 | |||||||||||
| CAZy Family | CBM51 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1988895; End: 1994885 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM51 | 1600 | 1739 | 6.2e-45 | 0.9850746268656716 |
| CBM51 | 1085 | 1219 | 8.9e-36 | 0.9850746268656716 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08305 | NPCBM | 2.37e-49 | 1600 | 1739 | 4 | 135 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| smart00776 | NPCBM | 2.02e-44 | 1600 | 1739 | 6 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
| pfam08305 | NPCBM | 1.80e-43 | 1082 | 1220 | 1 | 136 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| smart00776 | NPCBM | 1.10e-33 | 1085 | 1219 | 6 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
| pfam13402 | Peptidase_M60 | 1.60e-23 | 615 | 884 | 1 | 268 | Peptidase M60, enhancin and enhancin-like. This family of peptidases contains a zinc metallopeptidase motif (HEXXHX(8,28)E) and possesses mucinase activity. It includes the viral enhancins as well as enhancin-like peptidases from bacterial species. Enhancins are a class of metalloproteases found in some baculoviruses that enhance viral infection by degrading the peritrophic membrane (PM) of the insect midgut. Bacterial enhancins are found to be cytotoxic when compared to viral enhancin, however, suggesting that the bacterial enhancins do not enhance infection in the same way as viral enhancin. Bacterial enhancins may have evolved a distinct biochemical function. These bacterial domains are peptidases targetting host glycoproteins and thus probably play an important role in successful colonisation of both vertebrate mucosal surfaces and the invertebrate digestive tract by both mutualistic and pathogenic microbes. This family has been augmented by a merge with the sequences in the Enhancin Pfam family. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AQM59432.1 | 0.0 | 1 | 1996 | 1 | 2445 |
| AIY84110.1 | 0.0 | 1 | 1996 | 1 | 1925 |
| ABG84962.1 | 0.0 | 45 | 1980 | 272 | 2127 |
| AMN32462.1 | 0.0 | 45 | 1980 | 272 | 2127 |
| AQW26342.1 | 0.0 | 45 | 1980 | 272 | 2127 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7JFS_A | 0.0 | 40 | 1003 | 22 | 981 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 6XSX_A | 3.10e-297 | 492 | 1002 | 18 | 528 | ChainA, ZmpA Glycopeptidase [Clostridium perfringens ATCC 13124] |
| 7JS4_A | 1.34e-229 | 492 | 1298 | 18 | 831 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 5KDJ_A | 4.28e-195 | 433 | 1081 | 24 | 672 | ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDJ_B ZmpB metallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124] |
| 5KDN_A | 1.38e-159 | 492 | 1003 | 18 | 530 | ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDS_A ZmpB metallopeptidase in complex with an O-glycopeptide (a2,6-sialylated core-3 pentapeptide). [Clostridium perfringens ATCC 13124],5KDU_A ZmpB metallopeptidase in complex with a2,6-Sialyl T-antigen [Clostridium perfringens ATCC 13124] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P56957 | 2.21e-08 | 982 | 1315 | 229 | 602 | Pesticidal crystal protein Cry22Aa OS=Bacillus thuringiensis OX=1428 GN=cry22Aa PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000289 | 0.999047 | 0.000191 | 0.000175 | 0.000154 | 0.000132 |