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CAZyme Information: MGYG000001553_02492

You are here: Home > Sequence: MGYG000001553_02492

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_P mediterraneense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P mediterraneense
CAZyme ID MGYG000001553_02492
CAZy Family GT2
CAZyme Description Linear gramicidin synthase subunit D
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
4290 MGYG000001553_5|CGC20 495019.55 5.0924
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001553 3045114 Isolate not provided not provided
Gene Location Start: 2229603;  End: 2242475  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001553_02492.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12467 PRK12467 0.0 325 1668 52 1426
peptide synthase; Provisional
PRK12316 PRK12316 0.0 14 2845 2288 5140
peptide synthase; Provisional
PRK05691 PRK05691 0.0 46 1617 373 1998
peptide synthase; Validated
PRK12316 PRK12316 0.0 2862 3865 51 1080
peptide synthase; Provisional
PRK12467 PRK12467 0.0 1819 3865 51 2159
peptide synthase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND46664.1 0.0 902 3847 75 2639
BAY90071.1 2.13e-241 474 3846 296 3259
BAY30132.1 5.28e-230 495 3846 318 3270
BAZ00088.1 3.45e-228 495 3872 318 3295
BAZ75991.1 3.45e-228 495 3872 318 3295

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MFZ_A 5.06e-294 2268 3856 204 1784
Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
6MFY_A 2.96e-279 2268 3788 204 1714
Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis]
2VSQ_A 9.34e-201 1812 2843 7 1041
Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis]
6MFW_A 8.92e-179 2268 3263 204 1188
Crystalstructure of a 4-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis]
6MFX_A 1.01e-177 2268 3263 204 1188
Crystalstructure of a 4-domain construct of a mutant of LgrA in the substrate donation state [Brevibacillus parabrevis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P94459 0.0 1812 3874 5 2073
Plipastatin synthase subunit D OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsD PE=1 SV=2
Q70LM4 0.0 18 3847 743 4649
Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1
Q04747 0.0 1813 3867 5 2065
Surfactin synthase subunit 2 OS=Bacillus subtilis (strain 168) OX=224308 GN=srfAB PE=1 SV=3
Q70LM5 0.0 18 3873 3343 7274
Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis OX=54914 GN=lgrC PE=3 SV=1
P39847 0.0 13 1804 748 2545
Plipastatin synthase subunit C OS=Bacillus subtilis (strain 168) OX=224308 GN=ppsC PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999922 0.000106 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001553_02492.