CAZyme Information: MGYG000001554_01522

Basic Information

• Species: Corynebacterium phoceense
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium phoceense
• CAZyme ID: MGYG000001554_01522
• CAZy Family: CBM48
• CAZyme Description: 1,4-alpha-glucan branching enzyme GlgB

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
706	MGYG000001554_2|CGC5	79563.36	5.0907

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001554	2774100	Isolate	not provided	not provided

• Gene Location: Start: 672278; End: 674398 Strand: -

Full Sequence      

MSIPQSDLDLLNSCRHWAPHDFYGWHDGVVRTRKPGAESVELVTAEKTIAMTNVGNDIWE
ACLVREADYRLRVTYPGQPAREVADGYHFLPTLGTFDLHLIGEGRHERLWEVLGANLKSY
ETDLGVVEGVAFAVWAPNAVGVAVVGDFCGWNPTQYPMRSLGSTGIWEVFVPGIGVGERY
KFAIQTKHSGRIDKADPLAKATVAPPATDSVVARSTYKWNDHKWIDARTGDINVPVNIYE
VHVGSWKIGSNYNVLREELIPYLLEHNYTHVELMPVAEHPFGGSWGYQVSGYYAPSARWG
SPEDLKALIDALHQAGIGVIIDWVPAHFPKDEFALGRFDGQALYEHPDPRRGEQSDWGTY
VFDFGRNEVRNFLVANALYWAEEYHVDGLRVDAVASMLYLDYSREEWLPNQYGGRENLEA
VQFLQETNGTLHRAHPGVWTIAEESTSWDGVTRPTSDGGLGFDFKWNMGWMNDTLEYFKR
EPVHRSYHHGELTFSMVYAYSEHYILPFSHDEVVHGKGTIWGRQPGDDWNKAAGVRALYA
YMYSHPGKNLLFMGQEFGQTTEWNESSSVDWSNLEGWGHEWHQGIKKLSRDLGALYKNTP
ALYTRDFDPSGFHWVVGDDANGSVLAYERYGEDGSALLAVINLSGSSHTHYQLHPTRPGC
WELVLNTDDSSYEGAGNNLPSEFTAGDDGAWLHLPANSAQWYVYRG

Enzyme Prediction     

EC	2.4.1.18

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH13	261	559	5.3e-156	0.9966777408637874
CBM48	124	205	1.7e-16	0.9342105263157895

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK05402	PRK05402	0.0	3	703	1	722	1,4-alpha-glucan branching protein GlgB.
PRK14706	PRK14706	0.0	117	690	27	600	glycogen branching enzyme; Provisional
PRK12313	PRK12313	0.0	96	706	10	629	1,4-alpha-glucan branching protein GlgB.
PRK14705	PRK14705	0.0	16	689	516	1200	glycogen branching enzyme; Provisional
COG0296	GlgB	0.0	89	702	2	626	1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QPK80016.1	0.0	1	706	1	706
QQU93152.1	0.0	1	706	1	706
ACP32678.1	0.0	1	706	1	706
ATZ05556.1	0.0	1	706	1	706
ATZ07677.1	0.0	1	706	1	706

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3K1D_A	3.26e-291	16	701	18	718	Crystalstructure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV [Mycobacterium tuberculosis H37Rv]
5GQW_A	7.93e-215	29	675	60	737	Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A	7.93e-215	29	675	60	737	Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A	1.12e-214	29	675	60	737	Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A	3.18e-214	29	675	60	737	Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8NR40	0.0	1	702	9	727	1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=glgB PE=3 SV=1
Q6NHR6	0.0	8	705	15	731	1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=glgB PE=3 SV=1
Q8FQ12	0.0	3	706	11	731	1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) OX=196164 GN=glgB PE=3 SV=1
Q0SGR9	1.28e-307	6	701	14	727	1,4-alpha-glucan branching enzyme GlgB OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=glgB PE=3 SV=1
Q73X75	1.05e-296	6	701	17	727	1,4-alpha-glucan branching enzyme GlgB OS=Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) OX=262316 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000038	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001554_01522.