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CAZyme Information: MGYG000001560_00195

You are here: Home > Sequence: MGYG000001560_00195

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium coli
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
CAZyme ID MGYG000001560_00195
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1090 123070.23 4.0892
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001560 2985330 Isolate not provided not provided
Gene Location Start: 231742;  End: 235014  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001560_00195.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 48 821 2.7e-73 0.8009708737864077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.01e-12 209 624 349 727
alpha-L-rhamnosidase.
PRK10340 ebgA 1.44e-05 928 994 111 177
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02837 Glyco_hydro_2_N 3.97e-05 912 994 53 133
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGH70002.1 1.66e-238 2 1037 46 1113
QYN20448.1 4.91e-210 16 1038 22 1119
SDG73971.1 5.32e-208 42 1037 3 960
SDS67158.1 7.95e-199 42 1007 3 944
QHC72677.1 3.58e-198 50 1031 12 971

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001521 0.410157 0.586369 0.001049 0.000531 0.000343

TMHMM  Annotations      download full data without filtering help

start end
12 34
1067 1086