CAZyme Information: MGYG000001560_01167

Basic Information

• Species: Massilioclostridium coli
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
• CAZyme ID: MGYG000001560_01167
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1349	MGYG000001560_1|CGC15	149489.56	4.015

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001560	2985330	Isolate	not provided	not provided

• Gene Location: Start: 1383781; End: 1387830 Strand: -

Full Sequence      

MKLKNKAKKALGVLLAATMLSTVAASAVSAIGDNVAGTADFASKLESQYTDPDRVYSTEV
RWWIGEASNTDEALLEEIQALYDAGFRGVELCMQSDGNAPDDTYAYGSEMWSHKWKLMMN
KILDLGMTLSLTSGTNWSTSNVPGLDPDSQEASQVVAMGSQVVKAGESITALPKPSTQRE
SNKGKFVAAYAGKLASTDGESYVVEPGSMIDLSNQVTAVEGATVYDQAINWTAPADSDYV
VFGYWTHGNYKTASPAAETCYATNYFDTRGVDALRSFWEEHYLNDPELNEKIKEGDVQLF
MDSIELNPDGGITWWTEDIRQEFINRKGYDIMPYLFLVDGLPQVQAVHDPYYPPAEGTHD
LENDKDTREKIINDWVDVLTQLYCENMLQPLKEWLNSVGIETRAQISYGRSFEITEPAMY
VDYPEAESFNQYNQVDILRLHSAGNHLLDKVLSSETGTELSTYYTPQQLRLEDAYTMYAS
GFQRLIWHIWSAGYTYGENAAWPGWGSGFDRWGTREPSYKDFDEFNAHLGRIQQMLQTGN
SRTDVGFIHNNWNQGVRFGGESGDGLTGMQYMMAHQGVYYRSTELQDNGYTYDYLSPDIL
KAEGVYFDENTKTVEPAGYKSLVLYQDWLDVDGAKLIYEWAQKGLPVFIMEGAAERTTFN
DGKDEELASIMEQMRALPNVKDVEIYDASEDFDYFDKVAEGYDDGLYDAMQEMGIRPYAE
FNGANHQLLTQTREAEDGSRYLYAYNYCSNDYHENSFIDEVKTEDHGTNIKTEIRMDGMY
IPYTIDSWTGEVTEIGNYYYEDGQTVFPIDLDYDDIALYAFEPVTEESFHATSTNADMAY
GTENGVAVRATQSGTYTTELSSGRTVTEEINVPESYPITNWDVTVESWTPSENVLRSEET
IGDVHTVNTKVDTDKTDINVKLDELTTWNNIPEVGESVSGIGYYDAKFNWDSSSADGAYI
DFGDEFYSSMKVWINGQKVGGDVSTNPTKVPQSVIEGYEGTEQYTGGISSTDPVADISEY
LVDGENTIHIEYSSPLGNVQLSRGAIKPGGGRNWWGEMRQTKYLPYGPSQAVIVPFVDSE
YEVADKDILNTVIDYAEQQKASDEFNNVIADVQKTFNAALDAAKAVAADPAATQEEVDAA
WKTLMTEIHKLGFVKGDITSLETLVALAEGYDMNDYVEAGQAEFKEALATAQAILADKDN
AMQAEIETAETNLLNAMLNLRYKADKSILESVLAEANGKDASAYTAESYAVLTAAVAEAN
DVMADENATQEEVDAAVTNVQAAMDQLVAVDGRVPEETTPSTDDTATQTGQESTTPKANA
AKTGDFAPIAGLAAITLAGAALLFTRKKR

Enzyme Prediction     

No EC number prediction in MGYG000001560_01167.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	45	981	1.6e-63	0.9101941747572816

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	1.98e-15	203	796	347	870	alpha-L-rhamnosidase.
pfam07554	FIVAR	1.46e-05	1229	1288	3	69	FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AHF25191.1	0.0	41	1079	57	1150
QGH71057.1	0.0	41	1081	81	1131
QGH70002.1	1.97e-129	20	1066	67	1110
QYN20448.1	1.23e-122	22	1044	34	1087
QHO90364.1	1.53e-116	45	1044	32	1006

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000315	0.998886	0.000185	0.000221	0.000196	0.000173

TMHMM  Annotations     

start	end
12	31
1326	1345