CAZyme Information: MGYG000001560_01552

Basic Information

• Species: Massilioclostridium coli
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
• CAZyme ID: MGYG000001560_01552
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1524	MGYG000001560_2|CGC1	170394.67	4.14

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001560	2985330	Isolate	not provided	not provided

• Gene Location: Start: 114047; End: 118621 Strand: +

Full Sequence      

MFKKITAGILAAFITLSMFVNFSVFAEEEYEPRNAALSICGAIADASSTHPADSNPLSFQ
PCNTNDGIRNLGLFWNDNTANDYPDWLQITFGRREIINRLDVFTVSDDIGASMPDLDTVF
HNYGVTDFELQYLDNGEWKTIPGTQVTGNNKVWKQFYFEPITTTAIRLWVTGAIDGSTRI
SELEAWTYKESPDGEPEPPEQNQAFQDAQWLWQPEAGPNNTWMCFKKEFHLDTVPETAIA
NIAVDSKYYMWINGELAVFEGGLNRGPAPGKGYYDAVDIAPYLKEGENDISILMWFWGNQ
GRNNVNSGAGGMIFSADLGETRLKSDASWKMKVHPAYGDTTGSQPSYLYGGYNIGFNAQN
DFETDWTQPGFDTSSWKNAIEKGVVGTKPWGELEKRPIPQWKYSELKDYTNEIVRNGNQV
IMNLPYAAQITPYFKVKAPSGEIISIQTDRYQTPGGPGDGNKYNCHRTEYTTKEGVQEFE
SLDWIFGEQVIYTIPEDVEIIELKYRESGCDTELVPTIQTDDEFYNSLAEKAQRTLYVCM
RDNFMDCPDRERGQWIGDVSSQAPQVFYALDQNGAVHLKKAIDNFIRNRNGDVLIGNVPG
ANSSELPSQSLNAISTEGMIMQYYQFTGDLSVIELSYEPVKNYLKLWETNPDGSLINRAG
NWEWYDHGSGIDGAVIGPCWYYMACESAIEMAKLTGNEQDIPWFEERMEGIRSTFQEKFW
KGDGYHSDMPNDDRANAMAVLSGLADPDYYPIILDVLQTVRNSTPYMEGYVLESMFMMGY
PNEAMERMKLRYTDLVANENSTLWEDFYYLGTKNHAWSGGPLTMLNKYVAGIYPTTPGYE
TYRVQPNLTSLNSVKVTVPSIKGNIDLNINRDNNQITMDLTSPENTVAQVAVPRFNMENT
LVTINGEIAFEDGAGKLDSYQGNDENYIYFDLEPGNYQICSSIKTEQKENYQVNIQTNEG
GTLLLNGEPIPSNYQNSFPAGTELTFSAEPEEGKQFEGFTGSFATTNLPLTIQLQSDLNL
QASFCDKMIDWDEIKSELKLELNACKKLEESKYTPESWSPFKAAIEQAEIIMDTVPVTEE
QINQALESLRNAKEQLQSAKGVNLALYSNVTVSSVVPGMSQFSADKLTDGIVSGAPITSN
CWSSNVSKDHKEWAQIDLGSALTFDQFVIYPRIDERGTGWGFPKDFTIKVSQDGETWTTV
VDETDYPFVGDTPQTFNFDSVDARYIRLDTTKLNAIVGEATDTYRVQLAEFEVYRQKDIA
VDSDKSILNKVIAYAEEQKASDEFNNVIVDVQESFNAALEAAKEIFADPTATQEKVDQAW
MTLLKEIHKLGFVKGDISSLESLVAYAEKLDLNDYVEAGQAEFQEALKAAQDLLADKENA
MQTEIETAETNLLNAMLNLRYKADKSILEKVIVEANDVDSSAYTAESYTALQAAVAEANE
VMENENATQEEVNAAVESVQEAMKGLVAVDKETTDTDKAEGIQTGQENTTTKANAVKTGD
VTPITGVMVLALAGTAVLFSRKKK

Enzyme Prediction     

No EC number prediction in MGYG000001560_01552.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	438	891	5.4e-77	0.9444444444444444
CBM67	208	390	1.1e-34	0.9943181818181818
CBM32	1121	1252	6.3e-23	0.8629032258064516

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	1.68e-20	517	829	5	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam00754	F5_F8_type_C	6.38e-19	1109	1234	1	116	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057	FA58C	4.57e-11	1139	1254	34	142	Substituted updates: Jan 31, 2002
pfam17390	Bac_rhamnosid_C	5.41e-07	831	894	1	65	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam00754	F5_F8_type_C	1.63e-06	66	184	19	126	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QJT00118.1	3.52e-199	208	1253	42	1119
AVV47733.1	1.84e-198	208	1253	17	1094
QTU58279.1	5.45e-197	208	1253	42	1119
QEV28934.1	8.41e-195	208	1253	42	1119
AXE90460.1	1.65e-194	208	1253	42	1119

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	5.93e-22	225	939	179	939	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
2OKX_A	7.26e-17	366	863	383	910	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
3CIH_A	3.16e-14	490	881	276	686	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH9	5.00e-10	1126	1520	1507	1921	Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000259	0.999153	0.000162	0.000143	0.000134	0.000126

TMHMM  Annotations     

start	end
7	26
1501	1520