CAZyme Information: MGYG000001560_01727

Basic Information

• Species: Massilioclostridium coli
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
• CAZyme ID: MGYG000001560_01727
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1260	MGYG000001560_2|CGC4	136763.03	3.9991

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001560	2985330	Isolate	not provided	not provided

• Gene Location: Start: 318221; End: 322003 Strand: -

Full Sequence      

MKKAKKLIAAVTSLALAASCFTGVLPVQAAESGNSTFQTEFKNASNHDSKLRVRYWIPGG
WAAKDLDEIDREIKELADAGYGCVEVADVRDKMSQSELDALAQKDENGDTYLYGSKNWEK
SVKQILKSAKKYGLTVDMTFGQRWPASSNEITPNDDAAAKELVYGTVELSNGQNYQGSVP
VTSKVTTTNEENPVIENDLIGIYAAKYDSTKEVETGGGWMQPATKYTQYSLDQSTMVQLT
PNENGEIDFTAPDDNYVVVAIYQRGTGQLVGYQPSMDNHTGTNYDAYVVDHFSDAGVNVM
QKYYENNLFSDPETAELIKEVGGNWFEDSLEMTTAGLWTYDMLEEFQEETGYDLTNYLPF
VLKVTGMDSISNNSPFILTDDTDNLVTNVRNDYVETLSNLYNYERTQDMVDWAETYGMGY
RVQAYGSTIDSALTSAIATTPEGESLTFGNKHDSFRVMAAGRDMGGNTILSDEIGANFGY
GSAYGFPFDDLIANFNKNYAAGVNSMYLHGYSYAYSPEAQWPGFHAFGSDIPGPFSSRMP
EWEHINDITGYIDRTQYVLQQGVQKTDVAIYQPTYNASYGAPYYTDTGLTEAGYSYQFFT
RSLFNLDSAVIKDGVLNPDGPGYRAMIINNVSSMAVETIDKLIEYANAGFPIIVVGQTPT
TSISLVDNAQDVVNKFNELLAIDGVVQVENTSEVVSALEAKGIEPAVDKQTANADIVTIH
RTTEDADFYYLFNDAGEQAQLEIALEGNGTPYLLDGWTGEITPIANYTIEDGQIIVPVDL
ATNDAMMVGISSTGIFGEPADNHAISSNAKVSYKDGNLTVRATEDGTYTVVDEEGKEYNY
NVTGLAEPIDLNDWNLTVQSWSKGDNADNDVLDTKKEDIAVGKTDLIAWKDIPQLGSTVS
GIGTYSTTFNFDTSNNTSAYLDVTEVFDTFRVFVNGQQLPAINQITKQIDLGDYLVDGEN
TLVIEVASTLANAVGSKKIQEYGVIGDVCVVPYQDITVKEADKGVLNSVIAYAEQAKASG
EYDNAIASVQKSFDEALTNAKAVAGNAAATQEEVNAAWKTLMNEIHKLGFVAGDKTALAS
LIAAAEGIDLSKYVEAGQAEFTAALEAAQNTYNNGDAMQAEINEVADNLLNAMLNLRYKA
DKSILEEVVAEAEKVDANAYTAESYAVLEAAVNEAKAVLENENATQKEVDAAVQSVQAAM
DSLVAVEGTETPSDNNATQTGQENTTTKANAAKTGDFAPIAGVVMLAVAGTAVLLSRKKK

Enzyme Prediction     

No EC number prediction in MGYG000001560_01727.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	40	974	1.8e-101	0.9466019417475728

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	1.49e-24	245	769	364	873	alpha-L-rhamnosidase.
pfam07554	FIVAR	2.45e-05	1145	1204	3	69	FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZM79645.1	1.52e-149	52	998	65	1004
AGF60448.1	2.12e-149	52	998	62	1003
AEY86226.1	2.12e-149	52	998	62	1003
QUW89009.1	4.12e-149	52	998	65	1004
QMV04309.1	1.09e-148	10	993	25	997

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	7.83e-12	231	788	211	736	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000743	0.748713	0.249392	0.000458	0.000363	0.000296

TMHMM  Annotations     

start	end
7	29
1237	1256