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CAZyme Information: MGYG000001560_02306

You are here: Home > Sequence: MGYG000001560_02306

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium coli
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
CAZyme ID MGYG000001560_02306
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1050 115162.42 3.8528
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001560 2985330 Isolate not provided not provided
Gene Location Start: 111667;  End: 114819  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001560_02306.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 39 981 5e-141 0.9963592233009708

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.90e-36 233 782 347 869
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMW00580.1 8.49e-111 43 980 41 953
ASF41911.1 2.55e-108 40 982 33 950
QLF50224.1 4.91e-108 40 981 33 949
QIA09142.1 3.86e-105 41 951 39 929
AVM55612.1 2.37e-104 40 982 33 950

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 4.63e-19 224 982 393 1140
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 6.35e-13 236 935 363 1053
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 1.44e-12 236 935 363 1053
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 3.43e-25 39 754 30 671
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.007675 0.958567 0.002857 0.029584 0.000834 0.000447

TMHMM  Annotations      download full data without filtering help

start end
9 31
1026 1045