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CAZyme Information: MGYG000001562_00155

You are here: Home > Sequence: MGYG000001562_00155

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
CAZyme ID MGYG000001562_00155
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
970 MGYG000001562_10|CGC1 110145.08 4.6838
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001562 3488594 Isolate not provided not provided
Gene Location Start: 7317;  End: 10229  Strand: -

Full Sequence      Download help

MKRIFTKIPA  FGFIVAVLFT  AGCLSDDLER  SDNGSGTGST  EPTIPDNSVI  DAGVFSALNL60
DYPGLAAVKT  YYESDQHYLA  AQALLEYYRG  RTDVINGNVN  LIAPSISAEE  QVWADQALIA120
NEYRFYVEDY  MDGDVPYSYL  KSKAVDWTVC  PTGDLEQRYR  VHRHQWMVPQ  GKAYRTSLDE180
TYITEWVTVY  EDWLEKYPRP  TGEVDYEADP  ATQPEESREA  LYAWRPIDVA  YRVEDQCDLL240
YYFMQSTSFT  PQLLSKFLAN  LAEQAEHVRT  HYSEDTDVKA  TEAHAVFRAG  TIFPEMKKAE300
EWVESGSGSM  NEGIDASVFE  VLNLDYSGLT  KVKRAYDAGD  YYMALQELLN  YYRSRTHGLN360
PNVDLSNVTL  GTNDQRWADY  ALRENDYRFY  VNNYYDPNAG  EANVPYSYLN  SEGTGIDWTI420
WPTREQEQRY  QLHRHQWMVP  QAKTYYSLQD  EKYALNWIEV  YGDWLKQNPK  PEQGTDVTNH480
ASWRPLDVAA  RLIDQCALLE  YYQQSPSVTV  EWLSEVLKHL  DEHANHIVNN  YSTTSNHLIT540
QAQAVTFAGM  LFPELKNAAT  WKQSGTSVLS  REVTAQYFPD  GWLMDGDLHY  HISGIEDFRV600
SLDVARRNGE  ESRFPASYVE  SMRKMTDVVM  NMIYPDYTVP  NMADTRRATW  TARVLQRNLT660
NYYNLFPDNE  QMHWMATGGT  EGTVPETKVK  TFPDGGYYVM  RTGWTTADMM  MVLQNTPDNP720
SGGHNGAQWH  RQYDNNTFEL  WIKGRNFFPD  SGCFSYGGTS  ESNASRRKYA  ASTAHNTVTL780
DGKNVSSDGK  LLKQFSKSGS  GHWYEALVLE  NPSYTGLTHR  RTIFMVDDKF  YVILDEAYGS840
AEGTVNLNFN  ITEGNDSQVV  YDVEEGGFHT  AFTDSNNLLV  RTKASKSGAF  VKKTGFVSYN900
INQTSERKAY  QLNLTKTADE  PVVRYATVLL  PTSDASAETV  SITLGDWSET  GGSVRVQVGG960
VSYPALSYTL  970

Enzyme Prediction      help

No EC number prediction in MGYG000001562_00155.

CAZyme Signature Domains help

Created with Snap4897145194242291339388436485533582630679727776824873921695836PL12
Family Start End Evalue family coverage
PL12 695 836 1.6e-51 0.9923664122137404

CDD Domains      download full data without filtering help

Created with Snap4897145194242291339388436485533582630679727776824873921319674Hepar_II_III_N55320Hepar_II_III_N692882Hepar_II_III
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16889 Hepar_II_III_N 2.22e-130 319 674 1 344
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.
pfam16889 Hepar_II_III_N 7.74e-78 55 320 1 251
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.
pfam07940 Hepar_II_III 3.87e-24 692 882 9 192
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Created with Snap48971451942422913393884364855335826306797277768248739211970CBK62838.1|PL12_2311970QGT73986.1|PL12_2311970ALJ42863.1|PL12_2311970QMW86970.1|PL12_2311970QUT70295.1|PL12_2
Hit ID E-Value Query Start Query End Hit Start Hit End
CBK62838.1 0.0 1 970 1 964
QGT73986.1 8.69e-163 311 970 42 702
ALJ42863.1 6.78e-162 311 970 42 702
QMW86970.1 6.78e-162 311 970 42 702
QUT70295.1 6.78e-162 311 970 42 702

PDB Hits      download full data without filtering help

Created with Snap48971451942422913393884364855335826306797277768248739213119704FNV_A3119605JMD_A3119605JMF_A3199424MMH_A3199424MMI_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4FNV_A 2.48e-163 311 970 42 702
CrystalStructure of Heparinase III [Bacteroides thetaiotaomicron VPI-5482]
5JMD_A 9.19e-134 311 960 11 646
HeparinaseIII-BT4657 gene product, Methylated Lysines [Bacteroides thetaiotaomicron VPI-5482]
5JMF_A 4.01e-126 311 960 11 646
HeparinaseIII-BT4657 gene product [Bacteroides thetaiotaomicron VPI-5482]
4MMH_A 2.16e-101 319 942 10 606
Crystalstructure of heparan sulfate lyase HepC from Pedobacter heparinus [Pedobacter heparinus]
4MMI_A 2.16e-101 319 942 10 606
Crystalstructure of heparan sulfate lyase HepC mutant from Pedobacter heparinus [Pedobacter heparinus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap4897145194242291339388436485533582630679727776824873921311970sp|Q89YR9|HEPC_BACTN314970sp|C7EXL6|HEPC_BACSE309942sp|Q59289|HEPC_PEDHD
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89YR9 1.36e-162 311 970 42 702
Heparin-sulfate lyase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=hepC PE=1 SV=1
C7EXL6 1.79e-133 314 970 25 666
Heparin-sulfate lyase OS=Bacteroides stercoris OX=46506 GN=hepC PE=1 SV=1
Q59289 1.29e-100 309 942 24 630
Heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000065 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001562_00155.