CAZyme Information: MGYG000001562_00197

Basic Information

• Species: Alistipes timonensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
• CAZyme ID: MGYG000001562_00197
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
509		57205.7	6.2417

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001562	3488594	Isolate	not provided	not provided

• Gene Location: Start: 65477; End: 67006 Strand: +

Full Sequence      

MNKLFRPFLFAAGYLAAAAACTDDTTGGEPSGKPGHGDKPEYSYTAVEYRKIQSGSFKPW
TTADATETRTVRGMNWFSPVDGHVETAWGGRLDYGEPASVTGTEGYFRVGKADGRWYFLD
PDGGAVILHGTQHVRPGTSAEHVASFNGKFGNNAKWSAETGAMLASYGFNYISYGSNRVE
RFPDDIRENLLNPGNRKMAYAENLYLLRTFMWDMTANLGYAFEDGTYNRLVLAFEPTFQS
YVENLAREKCALFAGDKHFVGYYLDNELPFAAYENADAVKGIELKHFLSLPDKYKGARDF
AEAFMAQEGIASTEAITKANREKFRSAVADHYFQVTSTAVRKADPQHLILGSRLHDWSKY
TQGIVEACARYCDVVSVNYYARWQPEPDFMANLAAWCGNKPFIVTEFYVKGADANYKGRA
YTNTDGGGWLVRTQKNRGEFYQNFCLRLLETRNCAGWMHFEYNDGYGGTTDSNKGLVSVE
YTPYADYLNLARELHTNLYPLASYYDGER

Enzyme Prediction     

No EC number prediction in MGYG000001562_00197.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	144	499	3e-56	0.5513016845329249

CDD Domains     

MGYG000001562_00197 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRM98829.1	1.81e-238	4	506	6	513
QUT78441.1	4.21e-237	4	506	6	513
QDM11346.1	4.21e-237	4	506	6	513
QUT27032.1	2.42e-236	4	506	6	513
CBK69674.1	2.55e-236	18	506	4	495

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5T3B_A	3.83e-54	105	506	99	480	ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]
4BQ2_A	4.32e-18	105	499	260	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	1.01e-17	105	499	260	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A	5.85e-13	138	499	394	759	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	1.55e-12	90	501	472	951	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839	9.35e-10	329	499	744	913	Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000313	0.087555	0.911922	0.000064	0.000079	0.000058

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001562_00197.