CAZyme Information: MGYG000001562_00309

Basic Information

• Species: Alistipes timonensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
• CAZyme ID: MGYG000001562_00309
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
591	MGYG000001562_11|CGC2	65571.44	5.8206

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001562	3488594	Isolate	not provided	not provided

• Gene Location: Start: 116908; End: 118683 Strand: -

Full Sequence      

MPRLLKLAVSIFFVSFSLSVSAARPQLPPAWDGSPARFDSRTYAYMPPVRIVAQDEPGLI
SGCDLLLESGNGQSDLQNARICVLRSRDGRRPGLLLDFGRELQGGLRIVTGMPADNRPVR
VRIRFGESVSEAMCDIDGVNGASNDHAVRDFTLALPWLGTVECGDSGFRFARIDLLDDDR
ELHLKQVEAVFQYRDIPYVGSFRSSDERLDRIWATGAYTVHLCMQEFLWDGVKRDRLVWV
GDLHPEIMTVNSVFGYNEVVPRSLDLARDTTPLPGWMNGISSYSLWWIIIHSDWYRYHGD
RAYLAEQRPYLTALLRQIFGKIGPDGRERLDGTRFLDWPSSDDAASTAAGLQSLTILALD
AGAGLCDALGDAALAAECRTKAALMRNCPVGDGGEAKQGRSLMVLAGLADPAETDRDYIS
KGGSNGFSTFYGYYMLRAMAAAGNYEGALERIREYWGAMLDLGATTFWEDFDMAWLPAGR
IDEPVPAGMRDLHRECGAYCYKGFRHSLCHGWASGPTAWLTEYVLGVGVVEPGCRRLRID
PHLGDLEWVEGTFPTPYGVVKIRHEKAADGTVKSRVETPRGVKAELVKHNR

Enzyme Prediction     

No EC number prediction in MGYG000001562_00309.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	94	586	3.1e-101	0.9781746031746031

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	4.98e-14	199	524	3	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	5.00e-09	526	587	1	62	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT48045.1	1.49e-279	39	583	22	580
QUR50485.1	1.40e-272	39	583	23	579
QUT19201.1	8.08e-272	39	583	23	579
BBK91321.1	1.15e-271	39	583	23	579
QIX67104.1	1.15e-271	39	583	23	579

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CIH_A	6.89e-44	93	575	193	697	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
4XHC_A	4.65e-19	94	525	95	543	ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000235	0.999149	0.000170	0.000153	0.000140	0.000130

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001562_00309.