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CAZyme Information: MGYG000001562_00486

You are here: Home > Sequence: MGYG000001562_00486

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
CAZyme ID MGYG000001562_00486
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
590 MGYG000001562_11|CGC7 63700.75 5.2602
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001562 3488594 Isolate not provided not provided
Gene Location Start: 363396;  End: 365168  Strand: +

Full Sequence      Download help

MKRIFTTAVV  CLLAACGDSE  ELQNDTLLNA  TRNEQAVFEA  VEGTTVRLED  YLCVTGGTPP60
YSYASSLQGG  FHSTLERTVP  SAERTPAEYG  IWVCDSEGRQ  TKKPVVISLR  IHPAAEDRTP120
AFPGAEGGGR  YASGGRGGKI  YYVTNLLDAY  PTPPEGSLRW  ALTQPGPKIV  MFKVSGTIPL180
VAKLNLRNDG  AFAGQGLNVT  IAGETAPGDG  ICLKNWPLSI  FYAENVIVRF  LRFRLGDEVD240
TGAGQDACEV  QASTGVILDH  CSMSWSVDEC  GSFYRNRNFT  LQWCILTESL  RLSVHEKGTP300
HGYGGIWGGR  DASFHHNLIS  RHDSRNPRFD  STISYTETTP  IASWRGNVDF  RNNVVYGWGG360
EVAYGGDGGH  FNMLNNYYKE  GPHSPARNRF  LTAYAVAGTA  TTAFPEVHID  GNRYVTRTGT420
GLTRIEENNH  SGIVWSGAGG  EGIPAPPGRV  PEFPISGTKR  HTTTQSADEA  FSSVLESAGA480
WPRDKVDLRA  ATDARDGTAT  GYVAGANPSK  TGLIDSPSQI  GGYPVYETAE  APVDSDGDGM540
PDIWERACGL  NPADPADGSQ  YSLSETYTNV  EVYLHECAAA  LLREKRINEK  590

Enzyme Prediction      help

No EC number prediction in MGYG000001562_00486.

CAZyme Signature Domains help

Created with Snap295988118147177206236265295324354383413442472501531560175378PL1
Family Start End Evalue family coverage
PL1 175 378 4e-67 0.994535519125683

CDD Domains      download full data without filtering help

Created with Snap295988118147177206236265295324354383413442472501531560114328PelB198378Amb_all
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 8.94e-08 114 328 23 235
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 0.001 198 378 17 186
Amb_all domain.

CAZyme Hits      help

Created with Snap295988118147177206236265295324354383413442472501531560121575CBK63670.1|PL1_2111590AFL85053.1|PL1_2105585AHW58605.1|PL1_2102575AKD03736.1|PL1_2121575CCH01726.1|PL1_2
Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63670.1 5.89e-126 121 575 136 586
AFL85053.1 2.31e-124 111 590 26 485
AHW58605.1 3.75e-124 105 585 22 480
AKD03736.1 7.40e-122 102 575 26 455
CCH01726.1 9.27e-122 121 575 55 491

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap295988118147177206236265295324354383413442472501531560121569sp|B8NQQ7|PLYC_ASPFN103573sp|Q5B297|PLYC_EMENI121569sp|Q2UB83|PLYC_ASPOR103573sp|Q4WL88|PLYC_ASPFU121573sp|Q0CLG7|PLYC_ASPTN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 5.39e-38 121 569 22 411
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 6.99e-37 103 573 2 406
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q2UB83 3.25e-36 121 569 22 411
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q4WL88 1.16e-35 103 573 5 410
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q0CLG7 1.56e-35 121 573 22 409
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000054 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001562_00486.