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CAZyme Information: MGYG000001562_00956

You are here: Home > Sequence: MGYG000001562_00956

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
CAZyme ID MGYG000001562_00956
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
497 MGYG000001562_13|CGC1 57761.42 8.1847
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001562 3488594 Isolate not provided not provided
Gene Location Start: 25843;  End: 27336  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001562_00956.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 126 483 3.9e-51 0.5375191424196019

CDD Domains      help

MGYG000001562_00956 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT78441.1 3.60e-123 31 493 54 516
QDM11346.1 3.60e-123 31 493 54 516
QUR44781.1 6.98e-123 31 493 53 515
QRM98829.1 7.20e-123 31 493 54 516
CBK69674.1 8.24e-123 31 493 36 498

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5T3B_A 4.09e-54 224 491 240 481
ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]
5Z6P_A 2.24e-12 205 483 476 759
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
6XJ9_A 3.91e-12 204 483 475 759
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000739 0.998360 0.000311 0.000204 0.000195 0.000180

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001562_00956.