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CAZyme Information: MGYG000001562_01119
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Alistipes timonensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis | |||||||||||
| CAZyme ID | MGYG000001562_01119 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 252933; End: 255518 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 18 | 469 | 3.8e-63 | 0.4933510638297872 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 7.85e-27 | 26 | 488 | 14 | 466 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| PRK10340 | ebgA | 2.12e-21 | 113 | 461 | 141 | 481 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
| PRK09525 | lacZ | 5.27e-08 | 115 | 432 | 155 | 462 | beta-galactosidase. |
| pfam02836 | Glyco_hydro_2_C | 3.25e-05 | 309 | 452 | 1 | 157 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| pfam17786 | Mannosidase_ig | 0.003 | 617 | 661 | 5 | 49 | Mannosidase Ig/CBM-like domain. This domain corresponds to domain 4 in the structure of Bacteroides thetaiotaomicron beta-mannosidase, BtMan2A. This domain has an Ig-like fold. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADY53936.1 | 6.91e-283 | 19 | 853 | 451 | 1270 |
| AAU82837.1 | 1.80e-51 | 113 | 510 | 6 | 408 |
| QSR22851.1 | 5.66e-43 | 21 | 460 | 100 | 534 |
| QTD57081.1 | 3.08e-40 | 20 | 644 | 76 | 736 |
| ASV74706.1 | 1.75e-36 | 8 | 448 | 20 | 442 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1YQ2_A | 1.48e-15 | 105 | 451 | 147 | 464 | ChainA, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_B Chain B, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_C Chain C, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_D Chain D, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_E Chain E, beta-galactosidase [Arthrobacter sp. C2-2],1YQ2_F Chain F, beta-galactosidase [Arthrobacter sp. C2-2] |
| 6ZJV_A | 5.76e-15 | 98 | 467 | 142 | 479 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A [Arthrobacter sp. 32cB],6ZJW_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with galactose [Arthrobacter sp. 32cB],6ZJX_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with saccharose [Arthrobacter sp. 32cB] |
| 6ETZ_A | 7.49e-15 | 98 | 467 | 121 | 458 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB [Arthrobacter sp. 32cB],6H1P_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB - data collected at room temperature [Arthrobacter sp. 32cB] |
| 6SEB_A | 7.57e-15 | 98 | 467 | 142 | 479 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB in complex with IPTG [Arthrobacter sp. 32cB],6SEC_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cBon complex with ONPG [Arthrobacter sp. 32cB],6SED_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose [Arthrobacter sp. 32cB] |
| 6ZJP_A | 7.57e-15 | 98 | 467 | 142 | 479 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q [Arthrobacter sp. 32cB] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q59140 | 6.13e-15 | 24 | 433 | 29 | 435 | Beta-galactosidase OS=Arthrobacter sp. (strain B7) OX=86041 GN=lacZ PE=1 SV=1 |
| B4S2K9 | 2.24e-11 | 116 | 502 | 155 | 531 | Beta-galactosidase OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=lacZ PE=3 SV=1 |
| Q6LL68 | 3.85e-11 | 74 | 451 | 91 | 477 | Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1 |
| Q47077 | 3.85e-11 | 116 | 451 | 157 | 484 | Beta-galactosidase OS=Enterobacter cloacae OX=550 GN=lacZ PE=3 SV=1 |
| A1SWB8 | 6.66e-11 | 116 | 451 | 153 | 481 | Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000283 | 0.998942 | 0.000237 | 0.000179 | 0.000167 | 0.000155 |