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CAZyme Information: MGYG000001562_01260

You are here: Home > Sequence: MGYG000001562_01260

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
CAZyme ID MGYG000001562_01260
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
613 MGYG000001562_14|CGC3 68888.98 6.8014
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001562 3488594 Isolate not provided not provided
Gene Location Start: 156579;  End: 158420  Strand: +

Full Sequence      Download help

MNRLIHLIAL  LLLTTTFEPY  AADAARRIVR  VSDYGLQPGS  GRDALPVIRR  IIEENEGVRG60
LQIRFDKGRY  DFYPDAERQA  AGKPTTVFAL  TRTENVEIDG  GGCDWIFHGL  MKPVRLSECR120
NTTLRNVRID  WQQPYNSQAT  IVSATDTYLD  MEIDAERYPY  VVAGDSLAFV  GEYGLQRIVP180
EYTNLYDGTT  HELLYQTRDV  PLGRDMFRAR  VTDLGNNRVR  FHYRPAMKPA  PGTVVVFFHG240
RYITNGIEIV  DCRQTRIEQV  TIHHTLSCGV  FGIRSHDVAM  VGLDIVADER  SGRVFSTIAD300
ATHFIGCTGD  ILFDGCTVSG  SGDDFTNVHG  MYAPVAEVCG  ERSVRITPTS  RDQGFRPGER360
VWPLDTATMQ  RGRPLTSAGS  ERIEGSRDLL  LHFREPVAGR  IAAGNMLENA  TLCPRLTVRN420
CRMLKKNRGR  SILVTTPAKV  LIENNYFRSA  GAAVLIEGDT  DLWFESGAVC  DVTIRNNLFE480
DCYTSGNNIV  DGPWGWGEGV  ISISPSFRPQ  DADAEAYHRN  IRIVGNTFRH  FDCAVLFARS540
VEGLEFSRNR  LERTRTYEPF  YRPYNLFLDG  CRKVRVENNA  FEPDFPGHNI  AIEHMHPSEI600
TQRGGQPLAI  ICK613

Enzyme Prediction      help

No EC number prediction in MGYG000001562_01260.

CAZyme Signature Domains help

Created with Snap30619112215318321424527530633736739842945949052155158228579GH110
Family Start End Evalue family coverage
GH110 28 579 6.7e-129 0.9981751824817519

CDD Domains      help

MGYG000001562_01260 has no CDD domain.

CAZyme Hits      help

Created with Snap30619112215318321424527530633736739842945949052155158222600BCI63973.1|GH1106600QUT74399.1|GH11025600AHF13562.1|GH11029600AFL77293.1|GH11024600QQT77621.1|GH110
Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63973.1 1.62e-144 22 600 19 605
QUT74399.1 5.64e-140 6 600 4 607
AHF13562.1 8.74e-139 25 600 10 586
AFL77293.1 3.99e-127 29 600 28 601
QQT77621.1 3.17e-107 24 600 23 603

PDB Hits      download full data without filtering help

Created with Snap306191122153183214245275306337367398429459490521551582275657JW4_A275657JWF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 3.60e-75 27 565 26 579
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 1.90e-74 27 565 26 579
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Created with Snap30619112215318321424527530633736739842945949052155158224600sp|Q89ZX0|GLAB_BACTN28583sp|B2UNU8|GLAB_AKKM81600sp|Q5L7M8|GLAA_BACFN24557sp|B1KD83|GLAA_SHEWM1600sp|Q64MU6|GLAA_BACFR
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89ZX0 6.90e-107 24 600 23 603
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
B2UNU8 3.24e-67 28 583 218 771
Alpha-1,3-galactosidase B OS=Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP 107961 / Muc) OX=349741 GN=glaB PE=3 SV=1
Q5L7M8 4.38e-67 1 600 1 600
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
B1KD83 9.05e-66 24 557 28 557
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
Q64MU6 6.14e-65 1 600 1 600
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000267 0.999067 0.000186 0.000167 0.000152 0.000146

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001562_01260.