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CAZyme Information: MGYG000001562_01260

You are here: Home > Sequence: MGYG000001562_01260

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes timonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes timonensis
CAZyme ID MGYG000001562_01260
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
613 MGYG000001562_14|CGC3 68888.98 6.8014
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001562 3488594 Isolate not provided not provided
Gene Location Start: 156579;  End: 158420  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001562_01260.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 28 579 6.7e-129 0.9981751824817519

CDD Domains      help

MGYG000001562_01260 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63973.1 1.62e-144 22 600 19 605
QUT74399.1 5.64e-140 6 600 4 607
AHF13562.1 8.74e-139 25 600 10 586
AFL77293.1 3.99e-127 29 600 28 601
QQT77621.1 3.17e-107 24 600 23 603

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 3.60e-75 27 565 26 579
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 1.90e-74 27 565 26 579
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89ZX0 6.90e-107 24 600 23 603
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
B2UNU8 3.24e-67 28 583 218 771
Alpha-1,3-galactosidase B OS=Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP 107961 / Muc) OX=349741 GN=glaB PE=3 SV=1
Q5L7M8 4.38e-67 1 600 1 600
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
B1KD83 9.05e-66 24 557 28 557
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
Q64MU6 6.14e-65 1 600 1 600
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000267 0.999067 0.000186 0.000167 0.000152 0.000146

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001562_01260.